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The map label for this gene is yfbG [C]

Identifier: 124025107

GI number: 124025107

Start: 364132

End: 365088

Strand: Direct

Name: yfbG [C]

Synonym: NATL1_03941

Alternate gene names: 124025107

Gene position: 364132-365088 (Clockwise)

Preceding gene: 124025102

Following gene: 124025108

Centisome position: 19.53

GC content: 31.35

Gene sequence:

>957_bases
ATGCCCAAATCTCCTGTAAAAAACTTGGTTACTGGAGGGGCTGGCTTCGTTGGTTCTCATTTGATTGATCGTTTAATGAA
ATCTGGAGAAAAAGTTATATGTTTGGATAATTTTTTTACTGGGAGTAAAGAAAATATTGAACACTGGATTGGACATCCAT
CTTTTGAGCTTATAGATCATGATGTTATAGAGCCAATCAAGCTTGATGTGGATAGGATTTGGCATTTAGCTTGTCCAGCA
TCTCCAATTCATTATCAATTTAACCCTATTAAAACAGCGAAAACGAGTTTTTTGGGGACTTATAATATGCTTGGATTAGC
TAGGAAAGTTGGAGCTCGAATATTATTAGCAAGTACTAGTGAAGTTTATGGAAATCCCGAAATTCATCCTCAGCCTGAAA
AATATAACGGCAATGTAAATCCTATAGGAATTCGTAGTTGCTACGATGAGGGTAAACGTGTTGCGGAATCATTGTGTTAT
GACTATATGAGAATGCATGGTTTAGAAATAAGAATTGCTAGAATATTTAATACCTATGGTCCTAGAATGTTATTAAATGA
TGGAAGACTTATTAGCAACTTATTAGTTCAATCAATACATGGAAATGACTTGACTATTTATGGCAATGGTAAGCAAACTA
GAAGCTTTTGTTTTGTTGATGACTTAATAGATGGTTTAACTTTATTCATGAATTCTTTAAATGTAGGACCTATGAATTTA
GGCAATCCTGAAGAATTATCTATTCTTCAAATAACTAACTTCATAAGAAATATCTCAATTGAAAAAGTAAATCTGAAATT
TTTAAAAGCACTAGATGATGATCCTTTAAGAAGAAAGCCTGATATTTATCTTGCAAAAAAAGAATTAAATTGGGAGCCTA
AAATAATGTTTAAAGAAGGATTAGCAATTACAAGAAAGTATTTTGAAAAGAAATTAATCTTTGAAAAAAGTAAATAA

Upstream 100 bases:

>100_bases
TTTGATTTAGTTAATCCATAAAGATTTACGTGACATAAAATTAATCAATTTTGTAATTTTTGGCACGATACTAAAATAAA
ATTTTAAAGCTTAAAATTTC

Downstream 100 bases:

>100_bases
GTAATTAACTATTTTAAATTAAAAGTTAATGAATAAGATGCTATGATGATATTCAAATTTAATATTTTTTGTAAATTATA
ATAAACCCATGAATTCAAAG

Product: nucleoside-diphosphate-sugar epimerases

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MPKSPVKNLVTGGAGFVGSHLIDRLMKSGEKVICLDNFFTGSKENIEHWIGHPSFELIDHDVIEPIKLDVDRIWHLACPA
SPIHYQFNPIKTAKTSFLGTYNMLGLARKVGARILLASTSEVYGNPEIHPQPEKYNGNVNPIGIRSCYDEGKRVAESLCY
DYMRMHGLEIRIARIFNTYGPRMLLNDGRLISNLLVQSIHGNDLTIYGNGKQTRSFCFVDDLIDGLTLFMNSLNVGPMNL
GNPEELSILQITNFIRNISIEKVNLKFLKALDDDPLRRKPDIYLAKKELNWEPKIMFKEGLAITRKYFEKKLIFEKSK

Sequences:

>Translated_318_residues
MPKSPVKNLVTGGAGFVGSHLIDRLMKSGEKVICLDNFFTGSKENIEHWIGHPSFELIDHDVIEPIKLDVDRIWHLACPA
SPIHYQFNPIKTAKTSFLGTYNMLGLARKVGARILLASTSEVYGNPEIHPQPEKYNGNVNPIGIRSCYDEGKRVAESLCY
DYMRMHGLEIRIARIFNTYGPRMLLNDGRLISNLLVQSIHGNDLTIYGNGKQTRSFCFVDDLIDGLTLFMNSLNVGPMNL
GNPEELSILQITNFIRNISIEKVNLKFLKALDDDPLRRKPDIYLAKKELNWEPKIMFKEGLAITRKYFEKKLIFEKSK
>Mature_317_residues
PKSPVKNLVTGGAGFVGSHLIDRLMKSGEKVICLDNFFTGSKENIEHWIGHPSFELIDHDVIEPIKLDVDRIWHLACPAS
PIHYQFNPIKTAKTSFLGTYNMLGLARKVGARILLASTSEVYGNPEIHPQPEKYNGNVNPIGIRSCYDEGKRVAESLCYD
YMRMHGLEIRIARIFNTYGPRMLLNDGRLISNLLVQSIHGNDLTIYGNGKQTRSFCFVDDLIDGLTLFMNSLNVGPMNLG
NPEELSILQITNFIRNISIEKVNLKFLKALDDDPLRRKPDIYLAKKELNWEPKIMFKEGLAITRKYFEKKLIFEKSK

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=307, Percent_Identity=58.957654723127, Blast_Score=402, Evalue=1e-112,
Organism=Homo sapiens, GI7657641, Length=325, Percent_Identity=24, Blast_Score=86, Evalue=5e-17,
Organism=Escherichia coli, GI1788589, Length=342, Percent_Identity=27.4853801169591, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI48994969, Length=334, Percent_Identity=25.4491017964072, Blast_Score=88, Evalue=8e-19,
Organism=Escherichia coli, GI1788353, Length=339, Percent_Identity=24.188790560472, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17539532, Length=308, Percent_Identity=57.1428571428571, Blast_Score=379, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI115532424, Length=337, Percent_Identity=24.3323442136499, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71982038, Length=334, Percent_Identity=23.6526946107784, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17568069, Length=333, Percent_Identity=23.4234234234234, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI21356223, Length=304, Percent_Identity=55.5921052631579, Blast_Score=381, Evalue=1e-106,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36172; Mature: 36040

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSPVKNLVTGGAGFVGSHLIDRLMKSGEKVICLDNFFTGSKENIEHWIGHPSFELIDH
CCCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHH
DVIEPIKLDVDRIWHLACPASPIHYQFNPIKTAKTSFLGTYNMLGLARKVGARILLASTS
HHCCHHHCCHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECH
EVYGNPEIHPQPEKYNGNVNPIGIRSCYDEGKRVAESLCYDYMRMHGLEIRIARIFNTYG
HHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCC
PRMLLNDGRLISNLLVQSIHGNDLTIYGNGKQTRSFCFVDDLIDGLTLFMNSLNVGPMNL
CEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCC
GNPEELSILQITNFIRNISIEKVNLKFLKALDDDPLRRKPDIYLAKKELNWEPKIMFKEG
CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEECCC
LAITRKYFEKKLIFEKSK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKSPVKNLVTGGAGFVGSHLIDRLMKSGEKVICLDNFFTGSKENIEHWIGHPSFELIDH
CCCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHH
DVIEPIKLDVDRIWHLACPASPIHYQFNPIKTAKTSFLGTYNMLGLARKVGARILLASTS
HHCCHHHCCHHHHEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECH
EVYGNPEIHPQPEKYNGNVNPIGIRSCYDEGKRVAESLCYDYMRMHGLEIRIARIFNTYG
HHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHCCC
PRMLLNDGRLISNLLVQSIHGNDLTIYGNGKQTRSFCFVDDLIDGLTLFMNSLNVGPMNL
CEEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHHCCCCCCCCC
GNPEELSILQITNFIRNISIEKVNLKFLKALDDDPLRRKPDIYLAKKELNWEPKIMFKEG
CCCCHHHHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCEEECCC
LAITRKYFEKKLIFEKSK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]