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The map label for this gene is psbJ

Identifier: 124025092

GI number: 124025092

Start: 349436

End: 349633

Strand: Direct

Name: psbJ

Synonym: NATL1_03791

Alternate gene names: 124025092

Gene position: 349436-349633 (Clockwise)

Preceding gene: 124025091

Following gene: 124025094

Centisome position: 18.74

GC content: 44.44

Gene sequence:

>198_bases
ATGAGCAAATTAAAAGGTCCTGATGGACGAGTGGGAGATCGTCTTCCAGATGGTAGACCTGCAATCTCCTGGCAAAGACG
TTGGACAGAGGGAGCACTTCCTTTATGGTTAGTAGCTACTGCAGGTGGAACAGCTGTAATTTTTGTTCTGGGTATTTTCT
TTTATGGTTCATACACTGGTATTGGTAACGCTGGTTAG

Upstream 100 bases:

>100_bases
CGGTTGAGTTAAACCGGACAAGTCTTTATCTTGGACTCTTACTTGTTTTTGTAATGGGAATTCTTTTTTCCAGTTACTTC
TTTAACTAAATCTCTTTATC

Downstream 100 bases:

>100_bases
TTTCAACTAGATAAATACTATTTTAATTGAAATAAAAAAAACAACCGACACTTAATGTGTCGGTTGTTTTTTTTAAAGCC
AATATTTATCTGTAAATAAT

Product: photosystem II reaction center protein J

Products: NA

Alternate protein names: PSII-J

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MSKLKGPDGRVGDRLPDGRPAISWQRRWTEGALPLWLVATAGGTAVIFVLGIFFYGSYTGIGNAG

Sequences:

>Translated_65_residues
MSKLKGPDGRVGDRLPDGRPAISWQRRWTEGALPLWLVATAGGTAVIFVLGIFFYGSYTGIGNAG
>Mature_64_residues
SKLKGPDGRVGDRLPDGRPAISWQRRWTEGALPLWLVATAGGTAVIFVLGIFFYGSYTGIGNAG

Specific function: This protein is a component of the reaction center of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBJ_PROM1 (A2C0D3)

Other databases:

- EMBL:   CP000553
- RefSeq:   YP_001014208.1
- ProteinModelPortal:   A2C0D3
- SMR:   A2C0D3
- STRING:   A2C0D3
- GeneID:   4779710
- GenomeReviews:   CP000553_GR
- KEGG:   pme:NATL1_03791
- eggNOG:   NOG39942
- HOGENOM:   HBG635642
- OMA:   AVSWERR
- ProtClustDB:   PRK02565
- BioCyc:   PMAR167555:NATL1_03791-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_01305
- InterPro:   IPR002682

Pfam domain/function: PF01788 PsbJ

EC number: NA

Molecular weight: Translated: 6923; Mature: 6792

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe18f2c4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLKGPDGRVGDRLPDGRPAISWQRRWTEGALPLWLVATAGGTAVIFVLGIFFYGSYTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC
IGNAG
CCCCH
>Mature Secondary Structure 
SKLKGPDGRVGDRLPDGRPAISWQRRWTEGALPLWLVATAGGTAVIFVLGIFFYGSYTG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCC
IGNAG
CCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA