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The map label for this gene is selD [H]

Identifier: 124025094

GI number: 124025094

Start: 350624

End: 352804

Strand: Direct

Name: selD [H]

Synonym: NATL1_03811

Alternate gene names: 124025094

Gene position: 350624-352804 (Clockwise)

Preceding gene: 124025092

Following gene: 124025098

Centisome position: 18.8

GC content: 31.13

Gene sequence:

>2181_bases
ATGTTCAGTGATCATCTCGTTCTAGCTGGTGGTGGTCATACTCATGCCCTTGTGTTGCTCCAGTGGGCAATGAATCCAAA
ATTGAAGCCTGCTGGAATGATTACTTTAGTTAATAAAGCAAGTACAACTGTTTATTCTGGAATGTTTCCAGGTGTCATAG
CAGGTAAATACAAGATAGATGAAATACTAATTGATTTGAGGAAACTTGCTTTAAAAGCAGGAGTTTCATTTGTGATGGCA
GAAATTGAGGGAATCAATCTTAAGGAAAAAAAGTTACTTTTAGCAGGACGGCCAGAAATTGAATATTCTCTATTATCCCT
AAATATAGGAACAAAAACTAATATAAATTCTAAACTTTTTATTAGAGGTGATAAAGATTTAGCTGTTCCAATTAAACCTT
TTTCTGAATCCTATAAATTTATTGTCGATCAAGATATCCACAAGAATGATTCTTCTGCAAAACCATTTGTAATTATTGGT
GGAGGATTCGCTGGAATAGAAATAGCTTTTTCTTTAAGAAAAAGATGGCCAAAAAGGCCTATTTTATTAAAAGTCAAATC
AGGAAGAAATATAAATAAAAATCTTTTAAGAAATTTAAAGGCTTTAGATATTGAAATTACACAAAAGCAACCATCTATTT
TATATCCAAAATTAATATGTACCGGTAATAAATCATTTAATTGGTTAAAGGATAGTGGTTTACCTATAGATGAGAATGGG
AGAGTTCTAACTGAAAAAACTCTTCAAGTCCTTAACTATCCAGAGTTATTTGCTGTAGGAGATTGTGGTGTCATTAAGGA
TTATCCTCGACCTTCTTCTGGAGTATGGGCGGTTCGTGCAGCAAAACCACTTGCAAATAATTTAGAGTTTATAACTAAAG
GTTTAAAACTAGAGGAATGGAAACCTCAAAGAAAAGCAATACAACTTTTGGATATCAATATTAGAAAAAAGAAATCTAAA
GCTTTTATTTCCTGGGGTGAAGTTATTATTGGTCCTTTTGATTTTTTATCAAGTTTCAAAGAATTAATTGATAAACAATT
TATCTCTAAATTTGATCTAGTTAAAGATATAAATTCAGATATGTCTTCTGAAGAAGAGATGATTAAATGTAGAGGATGTG
CGGCAAAATTAGCTTTTACTCCATTAAGTTCAGCATTAAAAAAAGTAGATTTAATAGAATCTTCAAAAGATGATTCTATT
AATATAGGGATATTAAATTCTGATAAAACTTTGATACAAAGTGTAGATGGATTCCCTTCTTTAATTAGTGATCCTTGGTT
AAATGGAAGACTTTTGGCGTTTCATTCCTGTTCTGATATTTGGGCATGCGGAGGATCTGTGATCTCTGCACAGTCTCTTA
TCAACTTACCATCCATATCTAATAATTTACAGAAAGAATTGTTATATCAAGTTTTGGAAGGTATTAATTCTGCTTTAACT
ATCCAAGGTGCAAATCTTATAGGTGGGCATACATTAGAATCAAGAAAAATATCTGAAGAGCCTTTTTCCCTAGGAATAGA
AAGCTCATTAACTGTAAATGGGGTTATTGATGATAAAAAATATTTTTGGCCTAAGGGAGGAATGAGAAATGGAGATGAAA
TTTTAATTAGTCGTTCTTTGGGAACTGGAATTATTTTTTCTGCATTTATGAATGGCCAAGTAAAACCTTATATACTTGAT
AATGTCTTAAAAGAAATGAATAAAAGTCAGCATGAGATTGTCAATTATATTAATCAATTAACAAATCTAAATCCACGCTC
AAAAATAGTTAATGCATGTACTGATATAACTGGATTTGGTTTGCTAGGTCATTTGTCAGAAATGTTGGAATCTACTAATA
GTGATCAATTAAAGATGAATTTAGAACCATTTAAAGTCACTCTTGAACTGGATAATATACCATTATATGATGGTGCAAAA
GAACTTTTAGATAAAGGCTTTGAAAGCACTTTAGCCCCTGCAAATCAAATTTTTCTAAAAAATATTGATGGAGATAAAAA
CTTAAGGTTTGAGCTCAAATCTAATGATTCTTCCTCTAACAGATCCTTTTATAATGCCATGCTAAAAATCTTAGTAGACC
CACAAACTTGTGGCCCTTTGGTTGTTTGTTGTTCATCGATTTATTCAGAAAAACTTATACAGCAAGGACCTTGGATTAAA
ATAGGTTTTATTTCTAAATAA

Upstream 100 bases:

>100_bases
GATTTTCTATCCTATATAGTCCGCTTCCGCCAATAATTCCTAATCTTGCTTGTTTGAAATCGTAGGCATCTGATTGTGTT
CCAGAAATATTCAAAAAATC

Downstream 100 bases:

>100_bases
ATACTTATTAGATTTTTAAAAAGCAATATTTTCATCAATTAATTTCATTCTTTGCCGTTTTATTTCTATTCCTATTTCTG
GTCCAGGTTCCCAACCTTTA

Product: selenide,water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase [H]

Number of amino acids: Translated: 726; Mature: 726

Protein sequence:

>726_residues
MFSDHLVLAGGGHTHALVLLQWAMNPKLKPAGMITLVNKASTTVYSGMFPGVIAGKYKIDEILIDLRKLALKAGVSFVMA
EIEGINLKEKKLLLAGRPEIEYSLLSLNIGTKTNINSKLFIRGDKDLAVPIKPFSESYKFIVDQDIHKNDSSAKPFVIIG
GGFAGIEIAFSLRKRWPKRPILLKVKSGRNINKNLLRNLKALDIEITQKQPSILYPKLICTGNKSFNWLKDSGLPIDENG
RVLTEKTLQVLNYPELFAVGDCGVIKDYPRPSSGVWAVRAAKPLANNLEFITKGLKLEEWKPQRKAIQLLDINIRKKKSK
AFISWGEVIIGPFDFLSSFKELIDKQFISKFDLVKDINSDMSSEEEMIKCRGCAAKLAFTPLSSALKKVDLIESSKDDSI
NIGILNSDKTLIQSVDGFPSLISDPWLNGRLLAFHSCSDIWACGGSVISAQSLINLPSISNNLQKELLYQVLEGINSALT
IQGANLIGGHTLESRKISEEPFSLGIESSLTVNGVIDDKKYFWPKGGMRNGDEILISRSLGTGIIFSAFMNGQVKPYILD
NVLKEMNKSQHEIVNYINQLTNLNPRSKIVNACTDITGFGLLGHLSEMLESTNSDQLKMNLEPFKVTLELDNIPLYDGAK
ELLDKGFESTLAPANQIFLKNIDGDKNLRFELKSNDSSSNRSFYNAMLKILVDPQTCGPLVVCCSSIYSEKLIQQGPWIK
IGFISK

Sequences:

>Translated_726_residues
MFSDHLVLAGGGHTHALVLLQWAMNPKLKPAGMITLVNKASTTVYSGMFPGVIAGKYKIDEILIDLRKLALKAGVSFVMA
EIEGINLKEKKLLLAGRPEIEYSLLSLNIGTKTNINSKLFIRGDKDLAVPIKPFSESYKFIVDQDIHKNDSSAKPFVIIG
GGFAGIEIAFSLRKRWPKRPILLKVKSGRNINKNLLRNLKALDIEITQKQPSILYPKLICTGNKSFNWLKDSGLPIDENG
RVLTEKTLQVLNYPELFAVGDCGVIKDYPRPSSGVWAVRAAKPLANNLEFITKGLKLEEWKPQRKAIQLLDINIRKKKSK
AFISWGEVIIGPFDFLSSFKELIDKQFISKFDLVKDINSDMSSEEEMIKCRGCAAKLAFTPLSSALKKVDLIESSKDDSI
NIGILNSDKTLIQSVDGFPSLISDPWLNGRLLAFHSCSDIWACGGSVISAQSLINLPSISNNLQKELLYQVLEGINSALT
IQGANLIGGHTLESRKISEEPFSLGIESSLTVNGVIDDKKYFWPKGGMRNGDEILISRSLGTGIIFSAFMNGQVKPYILD
NVLKEMNKSQHEIVNYINQLTNLNPRSKIVNACTDITGFGLLGHLSEMLESTNSDQLKMNLEPFKVTLELDNIPLYDGAK
ELLDKGFESTLAPANQIFLKNIDGDKNLRFELKSNDSSSNRSFYNAMLKILVDPQTCGPLVVCCSSIYSEKLIQQGPWIK
IGFISK
>Mature_726_residues
MFSDHLVLAGGGHTHALVLLQWAMNPKLKPAGMITLVNKASTTVYSGMFPGVIAGKYKIDEILIDLRKLALKAGVSFVMA
EIEGINLKEKKLLLAGRPEIEYSLLSLNIGTKTNINSKLFIRGDKDLAVPIKPFSESYKFIVDQDIHKNDSSAKPFVIIG
GGFAGIEIAFSLRKRWPKRPILLKVKSGRNINKNLLRNLKALDIEITQKQPSILYPKLICTGNKSFNWLKDSGLPIDENG
RVLTEKTLQVLNYPELFAVGDCGVIKDYPRPSSGVWAVRAAKPLANNLEFITKGLKLEEWKPQRKAIQLLDINIRKKKSK
AFISWGEVIIGPFDFLSSFKELIDKQFISKFDLVKDINSDMSSEEEMIKCRGCAAKLAFTPLSSALKKVDLIESSKDDSI
NIGILNSDKTLIQSVDGFPSLISDPWLNGRLLAFHSCSDIWACGGSVISAQSLINLPSISNNLQKELLYQVLEGINSALT
IQGANLIGGHTLESRKISEEPFSLGIESSLTVNGVIDDKKYFWPKGGMRNGDEILISRSLGTGIIFSAFMNGQVKPYILD
NVLKEMNKSQHEIVNYINQLTNLNPRSKIVNACTDITGFGLLGHLSEMLESTNSDQLKMNLEPFKVTLELDNIPLYDGAK
ELLDKGFESTLAPANQIFLKNIDGDKNLRFELKSNDSSSNRSFYNAMLKILVDPQTCGPLVVCCSSIYSEKLIQQGPWIK
IGFISK

Specific function: Synthesizes selenophosphate from selenide and ATP [H]

COG id: COG1252

COG function: function code C; NADH dehydrogenase, FAD-containing subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788062, Length=286, Percent_Identity=26.5734265734266, Blast_Score=82, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061 [H]

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]

EC number: =2.7.9.3 [H]

Molecular weight: Translated: 80464; Mature: 80464

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDHLVLAGGGHTHALVLLQWAMNPKLKPAGMITLVNKASTTVYSGMFPGVIAGKYKID
CCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCEECCCHHH
EILIDLRKLALKAGVSFVMAEIEGINLKEKKLLLAGRPEIEYSLLSLNIGTKTNINSKLF
HHHHHHHHHHHHHCHHEEEEHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCEEE
IRGDKDLAVPIKPFSESYKFIVDQDIHKNDSSAKPFVIIGGGFAGIEIAFSLRKRWPKRP
EECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
ILLKVKSGRNINKNLLRNLKALDIEITQKQPSILYPKLICTGNKSFNWLKDSGLPIDENG
EEEEECCCCCCCHHHHCCCCEEEEEEECCCCCEECCEEEEECCCCCCEECCCCCCCCCCC
RVLTEKTLQVLNYPELFAVGDCGVIKDYPRPSSGVWAVRAAKPLANNLEFITKGLKLEEW
CEEHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHCCCCCCCC
KPQRKAIQLLDINIRKKKSKAFISWGEVIIGPFDFLSSFKELIDKQFISKFDLVKDINSD
CCHHHEEEEEEEEEECCCCCEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MSSEEEMIKCRGCAAKLAFTPLSSALKKVDLIESSKDDSINIGILNSDKTLIQSVDGFPS
CCCHHHHHHHHCCHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCHH
LISDPWLNGRLLAFHSCSDIWACGGSVISAQSLINLPSISNNLQKELLYQVLEGINSALT
HHCCCCCCCEEEEEECCCCHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE
IQGANLIGGHTLESRKISEEPFSLGIESSLTVNGVIDDKKYFWPKGGMRNGDEILISRSL
EECCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCEEEEEECC
GTGIIFSAFMNGQVKPYILDNVLKEMNKSQHEIVNYINQLTNLNPRSKIVNACTDITGFG
CCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLGHLSEMLESTNSDQLKMNLEPFKVTLELDNIPLYDGAKELLDKGFESTLAPANQIFLK
HHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCCCCCHHHHHHCCHHHHCCCCCEEEEE
NIDGDKNLRFELKSNDSSSNRSFYNAMLKILVDPQTCGPLVVCCSSIYSEKLIQQGPWIK
ECCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEE
IGFISK
EEECCC
>Mature Secondary Structure
MFSDHLVLAGGGHTHALVLLQWAMNPKLKPAGMITLVNKASTTVYSGMFPGVIAGKYKID
CCCCCEEEECCCCCEEEEEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCCEECCCHHH
EILIDLRKLALKAGVSFVMAEIEGINLKEKKLLLAGRPEIEYSLLSLNIGTKTNINSKLF
HHHHHHHHHHHHHCHHEEEEHHCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCCCCEEE
IRGDKDLAVPIKPFSESYKFIVDQDIHKNDSSAKPFVIIGGGFAGIEIAFSLRKRWPKRP
EECCCCEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCC
ILLKVKSGRNINKNLLRNLKALDIEITQKQPSILYPKLICTGNKSFNWLKDSGLPIDENG
EEEEECCCCCCCHHHHCCCCEEEEEEECCCCCEECCEEEEECCCCCCEECCCCCCCCCCC
RVLTEKTLQVLNYPELFAVGDCGVIKDYPRPSSGVWAVRAAKPLANNLEFITKGLKLEEW
CEEHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCHHCCHHHHHCCCCCCCC
KPQRKAIQLLDINIRKKKSKAFISWGEVIIGPFDFLSSFKELIDKQFISKFDLVKDINSD
CCHHHEEEEEEEEEECCCCCEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MSSEEEMIKCRGCAAKLAFTPLSSALKKVDLIESSKDDSINIGILNSDKTLIQSVDGFPS
CCCHHHHHHHHCCHHHEEHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCHH
LISDPWLNGRLLAFHSCSDIWACGGSVISAQSLINLPSISNNLQKELLYQVLEGINSALT
HHCCCCCCCEEEEEECCCCHHHCCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEE
IQGANLIGGHTLESRKISEEPFSLGIESSLTVNGVIDDKKYFWPKGGMRNGDEILISRSL
EECCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCEEEEEECC
GTGIIFSAFMNGQVKPYILDNVLKEMNKSQHEIVNYINQLTNLNPRSKIVNACTDITGFG
CCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
LLGHLSEMLESTNSDQLKMNLEPFKVTLELDNIPLYDGAKELLDKGFESTLAPANQIFLK
HHHHHHHHHHCCCCCEEEEECCEEEEEEEECCCCCCCCHHHHHHCCHHHHCCCCCEEEEE
NIDGDKNLRFELKSNDSSSNRSFYNAMLKILVDPQTCGPLVVCCSSIYSEKLIQQGPWIK
ECCCCCCEEEEEECCCCCCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCEE
IGFISK
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA