| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is psbK
Identifier: 124025064
GI number: 124025064
Start: 324902
End: 325045
Strand: Direct
Name: psbK
Synonym: NATL1_03511
Alternate gene names: 124025064
Gene position: 324902-325045 (Clockwise)
Preceding gene: 124025063
Following gene: 124025068
Centisome position: 17.42
GC content: 41.67
Gene sequence:
>144_bases ATGGCACTGATTAATTTCGACTTGCTTGCTGAACTTCCAGTTGCATACCAAGCTTTTGCACCAACAGTGGATGTACTTCC GCTAATACCTCTTTTCTTTTTTCTGCTTGTTTTTGTTTGGCAAGCGGCAGTTGGCTTTCGTTAA
Upstream 100 bases:
>100_bases GAAGGTTGTTTTTCAGAGGATTTCGCTCCGTGGCAGAGTGACTCTAAAGCGCGTCATACGTGGTAGCGTGCGTGCTTGAT ACGTCCATTATTTCTTAGGG
Downstream 100 bases:
>100_bases AAGCGAAGTTTTTCTGCTGGATTTTTAAAAAATTAACTAATCGATTAGATATTCTTAACAAAATAAAATTTTTGTTCGAA GTAAGACATCGGGCAAATAT
Product: photosystem II reaction center protein K
Products: NA
Alternate protein names: PSII-K
Number of amino acids: Translated: 47; Mature: 46
Protein sequence:
>47_residues MALINFDLLAELPVAYQAFAPTVDVLPLIPLFFFLLVFVWQAAVGFR
Sequences:
>Translated_47_residues MALINFDLLAELPVAYQAFAPTVDVLPLIPLFFFLLVFVWQAAVGFR >Mature_46_residues ALINFDLLAELPVAYQAFAPTVDVLPLIPLFFFLLVFVWQAAVGFR
Specific function: This protein is a component of the reaction center of photosystem II
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the psbK family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PSBK_PROM1 (A2C0A5)
Other databases:
- EMBL: CP000553 - RefSeq: YP_001014180.1 - ProteinModelPortal: A2C0A5 - SMR: A2C0A5 - STRING: A2C0A5 - GeneID: 4779648 - GenomeReviews: CP000553_GR - KEGG: pme:NATL1_03511 - ProtClustDB: PRK02553 - BioCyc: PMAR167555:NATL1_03511-MONOMER - GO: GO:0015979 - HAMAP: MF_00441 - InterPro: IPR003687 - ProDom: PD004458
Pfam domain/function: PF02533 PsbK
EC number: NA
Molecular weight: Translated: 5298; Mature: 5167
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALINFDLLAELPVAYQAFAPTVDVLPLIPLFFFLLVFVWQAAVGFR CCCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALINFDLLAELPVAYQAFAPTVDVLPLIPLFFFLLVFVWQAAVGFR CCCCHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA