| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025056
Identifier: 124025056
GI number: 124025056
Start: 318277
End: 318810
Strand: Direct
Name: 124025056
Synonym: NATL1_03431
Alternate gene names: NA
Gene position: 318277-318810 (Clockwise)
Preceding gene: 124025055
Following gene: 124025058
Centisome position: 17.07
GC content: 36.14
Gene sequence:
>534_bases ATGACTCAAACAAACAAATCTAGTCTTAAAGATCCTGATTCACAAAAAGTCGAAGTGGTTGTTCAAAGCCCTGAAGGTGA AGTGAATATTTTTGGTGAACTGTCAATCTTTGTACTGAGAGTTAGTTTTAGTTTGTTCATGGTTCATCACGGTCTGGAAA AATTGAGTGATCCAGGAGGATTCGCTGAATTTGTGGTAGGCAAATACTTCAGCTTTCTTCCTGGTGATCCTGTTATTTGG ACTTATTTGGCGGCAGTAACTCAAATAGTTTGTCCAATTGGACTGGCAACCGGAGTATTGGCAAGATTATCCTCCTTGGG TCTACTCTCAACTATGGTTTTTGCTTTGTATTTCCATTTCATAGATACTGGTTTAGAGGGATTCCCTTTTGCTGTAGTCG AAAATCATAATTATATTTTTGAATTATCCGCTATTTATGCAGCAATATCATTTTATTTCTTATGTGCAGGTCCTGGTAGA TTGTCACTTTTCAGAAAGTCTAATAAAATAACTTATTATCCAAAAGGATCATAA
Upstream 100 bases:
>100_bases TTATTCACAAGCTAATGAAAATAGGCGAAAATTTTTGATAAGAAAAAAACGCAATTTTGCTCCAATCTCTCGTAGGATAG TTAATAGTTTTTAGTAGAAG
Downstream 100 bases:
>100_bases TTAAGTATAAATTTAAAGTAAGAAATAATATATTTAAGAAATCAAACTCTTTGAGTTTGTCTCAATGTAAAAAGTGCCTT TTACCAGTAAGAATCATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Subfamily; DoxX Subfamily Protein; Photosystem II Reaction Centre T Prot
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTQTNKSSLKDPDSQKVEVVVQSPEGEVNIFGELSIFVLRVSFSLFMVHHGLEKLSDPGGFAEFVVGKYFSFLPGDPVIW TYLAAVTQIVCPIGLATGVLARLSSLGLLSTMVFALYFHFIDTGLEGFPFAVVENHNYIFELSAIYAAISFYFLCAGPGR LSLFRKSNKITYYPKGS
Sequences:
>Translated_177_residues MTQTNKSSLKDPDSQKVEVVVQSPEGEVNIFGELSIFVLRVSFSLFMVHHGLEKLSDPGGFAEFVVGKYFSFLPGDPVIW TYLAAVTQIVCPIGLATGVLARLSSLGLLSTMVFALYFHFIDTGLEGFPFAVVENHNYIFELSAIYAAISFYFLCAGPGR LSLFRKSNKITYYPKGS >Mature_176_residues TQTNKSSLKDPDSQKVEVVVQSPEGEVNIFGELSIFVLRVSFSLFMVHHGLEKLSDPGGFAEFVVGKYFSFLPGDPVIWT YLAAVTQIVCPIGLATGVLARLSSLGLLSTMVFALYFHFIDTGLEGFPFAVVENHNYIFELSAIYAAISFYFLCAGPGRL SLFRKSNKITYYPKGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19512; Mature: 19381
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTNKSSLKDPDSQKVEVVVQSPEGEVNIFGELSIFVLRVSFSLFMVHHGLEKLSDPGG CCCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FAEFVVGKYFSFLPGDPVIWTYLAAVTQIVCPIGLATGVLARLSSLGLLSTMVFALYFHF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDTGLEGFPFAVVENHNYIFELSAIYAAISFYFLCAGPGRLSLFRKSNKITYYPKGS HHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCC >Mature Secondary Structure TQTNKSSLKDPDSQKVEVVVQSPEGEVNIFGELSIFVLRVSFSLFMVHHGLEKLSDPGG CCCCCCCCCCCCCCEEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCC FAEFVVGKYFSFLPGDPVIWTYLAAVTQIVCPIGLATGVLARLSSLGLLSTMVFALYFHF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDTGLEGFPFAVVENHNYIFELSAIYAAISFYFLCAGPGRLSLFRKSNKITYYPKGS HHCCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA