| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025038
Identifier: 124025038
GI number: 124025038
Start: 301839
End: 302765
Strand: Direct
Name: 124025038
Synonym: NATL1_03251
Alternate gene names: NA
Gene position: 301839-302765 (Clockwise)
Preceding gene: 124025037
Following gene: 124025039
Centisome position: 16.19
GC content: 28.05
Gene sequence:
>927_bases GTGACTGCTTGGCTTAAAATTCTTTTAGTATTAATCCTAGGTGGAATACTTTCTACGCTAGGAGATCGATTAGGTACTAG AGTAGGAAAAGCGCGTTTAAGTATTTTTAAATTAAGACCAAAAAGTACAGCGGTATTAATAACTGTTTTTACTGGAAGTA TTATTAGTGCTATTTCATTTGCAACGATGGTTGTATTTGATAGAGATTTAAGGGTTGGATTATTTCAGTTAGAGGATATT CGAGAAAAGATTATAGAGAGTGAAAAAGAATTAAAAAAATTAGAAAAAAATTTGTATGCTTTCAGGAGTGGAAATGTAGT AATAAGTAGTGGTCAAACTCTAGTAACTAAGACTATTAAATTAAATAAAACTAATGATATTAAAAAAATTATCGAAAGTA TATTACAGCAAGCAAATTTTTATGCTTTTAATTTAGTTAAAACAAATCAATCGGAATATCGAAGAATATTATTAGTTCGT AAAGATGATATTGAGAAACTTGAAAATAAAATAGCTGATAATAGAAGTTGGGTAGTAAGGATTAAATCAGCAGGAAATAT ACTTAGAGGTGAAAATTATGTTTATGCATTTCCTGAAGTCACATTAAATAAAATGATTACAAAGAAAGGTGAAGTTATTG CCATAGAAAATGTATCTTTATTAAAATCTGATTCTGAATCTATTAGTAAAAAGATTAATCTTTTAATGGCTTCAACTTTG GCTGAGGTTAGGCGACGAGGATCATTAAGTTCTGAGTTAAAAATTAATGCTAATCAGATTAATAATTTAGGAAAATATCT AGTTAGTATAAAAAAGGGAGAGTTCCAAATTATTGCTAGAGCTCTTGAAGATAGTCAAAGTGCAGAAAAAGTCTCAGTAT CATTAGAATTAAAGTCTTTAGAGAAATCTATATCAAACAAGAGTTAA
Upstream 100 bases:
>100_bases ATAACCATATTCGATCCAATAGCGTTAGCAAAAAGATTTAATTGAAGGCCATTGCATACTAAGGTTTAGGGGGTTTGATT AATTCTTCTTCTTTATCTCT
Downstream 100 bases:
>100_bases ATGAGTCTTTATATATCTATAGATCCTGGAATGAAAAAATGCGGCTTATTATTGGCTGATATGCAATCCGGAGAAGTTAT TGAAGCATGTGTCGCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MTAWLKILLVLILGGILSTLGDRLGTRVGKARLSIFKLRPKSTAVLITVFTGSIISAISFATMVVFDRDLRVGLFQLEDI REKIIESEKELKKLEKNLYAFRSGNVVISSGQTLVTKTIKLNKTNDIKKIIESILQQANFYAFNLVKTNQSEYRRILLVR KDDIEKLENKIADNRSWVVRIKSAGNILRGENYVYAFPEVTLNKMITKKGEVIAIENVSLLKSDSESISKKINLLMASTL AEVRRRGSLSSELKINANQINNLGKYLVSIKKGEFQIIARALEDSQSAEKVSVSLELKSLEKSISNKS
Sequences:
>Translated_308_residues MTAWLKILLVLILGGILSTLGDRLGTRVGKARLSIFKLRPKSTAVLITVFTGSIISAISFATMVVFDRDLRVGLFQLEDI REKIIESEKELKKLEKNLYAFRSGNVVISSGQTLVTKTIKLNKTNDIKKIIESILQQANFYAFNLVKTNQSEYRRILLVR KDDIEKLENKIADNRSWVVRIKSAGNILRGENYVYAFPEVTLNKMITKKGEVIAIENVSLLKSDSESISKKINLLMASTL AEVRRRGSLSSELKINANQINNLGKYLVSIKKGEFQIIARALEDSQSAEKVSVSLELKSLEKSISNKS >Mature_307_residues TAWLKILLVLILGGILSTLGDRLGTRVGKARLSIFKLRPKSTAVLITVFTGSIISAISFATMVVFDRDLRVGLFQLEDIR EKIIESEKELKKLEKNLYAFRSGNVVISSGQTLVTKTIKLNKTNDIKKIIESILQQANFYAFNLVKTNQSEYRRILLVRK DDIEKLENKIADNRSWVVRIKSAGNILRGENYVYAFPEVTLNKMITKKGEVIAIENVSLLKSDSESISKKINLLMASTLA EVRRRGSLSSELKINANQINNLGKYLVSIKKGEFQIIARALEDSQSAEKVSVSLELKSLEKSISNKS
Specific function: Unknown
COG id: COG4372
COG function: function code S; Uncharacterized protein conserved in bacteria with the myosin-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021435 [H]
Pfam domain/function: PF11283 DUF3084 [H]
EC number: NA
Molecular weight: Translated: 34553; Mature: 34422
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAWLKILLVLILGGILSTLGDRLGTRVGKARLSIFKLRPKSTAVLITVFTGSIISAISF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHH ATMVVFDRDLRVGLFQLEDIREKIIESEKELKKLEKNLYAFRSGNVVISSGQTLVTKTIK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCEEEEEEEE LNKTNDIKKIIESILQQANFYAFNLVKTNQSEYRRILLVRKDDIEKLENKIADNRSWVVR ECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHEEEEEECHHHHHHHHHHCCCCEEEEE IKSAGNILRGENYVYAFPEVTLNKMITKKGEVIAIENVSLLKSDSESISKKINLLMASTL ECCCCCEECCCCEEEECCCHHHHHHHCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHH AEVRRRGSLSSELKINANQINNLGKYLVSIKKGEFQIIARALEDSQSAEKVSVSLELKSL HHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEHHHH EKSISNKS HHHHCCCC >Mature Secondary Structure TAWLKILLVLILGGILSTLGDRLGTRVGKARLSIFKLRPKSTAVLITVFTGSIISAISF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEHHHHHHHHHHH ATMVVFDRDLRVGLFQLEDIREKIIESEKELKKLEKNLYAFRSGNVVISSGQTLVTKTIK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEECCCEEEEEEEE LNKTNDIKKIIESILQQANFYAFNLVKTNQSEYRRILLVRKDDIEKLENKIADNRSWVVR ECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHEEEEEECHHHHHHHHHHCCCCEEEEE IKSAGNILRGENYVYAFPEVTLNKMITKKGEVIAIENVSLLKSDSESISKKINLLMASTL ECCCCCEECCCCEEEECCCHHHHHHHCCCCCEEEEECHHHHHCCHHHHHHHHHHHHHHHH AEVRRRGSLSSELKINANQINNLGKYLVSIKKGEFQIIARALEDSQSAEKVSVSLELKSL HHHHHCCCCCCEEEECHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHEEEEEEHHHH EKSISNKS HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11759840; 8391534 [H]