| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025039
Identifier: 124025039
GI number: 124025039
Start: 302766
End: 303203
Strand: Direct
Name: 124025039
Synonym: NATL1_03261
Alternate gene names: NA
Gene position: 302766-303203 (Clockwise)
Preceding gene: 124025038
Following gene: 124025044
Centisome position: 16.24
GC content: 29.91
Gene sequence:
>438_bases ATGAGTCTTTATATATCTATAGATCCTGGAATGAAAAAATGCGGCTTATTATTGGCTGATATGCAATCCGGAGAAGTTAT TGAAGCATGTGTCGCTTCATTAAATAAATTTTCTGATTTAGTTTCTCAATGGAATGAAGATCACGAGATTATTAAGATAA TAATTGGGAATGGGACTAATTGTAAGTATATAGAGAATAAATTAAAACGAAATAATTCTTTCAATATAAATTATGTCAAT GAAAGAGGATCAACTTTAAGAGCTCGGTTTAGATATTGGGAAATTTGGCCTCCAAATTATTTTATTCGTTGGCTTCCAAA AGAAATTCTTTTTCCTCCTGCAAACCTTGATGCAATTGTCGCGTTGATTTTATTGGAAGATTTTTTAAAATATAGATTAA TTTGGCCAAGTAAAGTAAATATTAAAACTTGGCCCTAA
Upstream 100 bases:
>100_bases AATTATTGCTAGAGCTCTTGAAGATAGTCAAAGTGCAGAAAAAGTCTCAGTATCATTAGAATTAAAGTCTTTAGAGAAAT CTATATCAAACAAGAGTTAA
Downstream 100 bases:
>100_bases CTGTAAAAATGTAATCTCCACCAGACTCAAGTTTATAATCAGCCTTTACTAAATAGCGCTCTAATGCATCTTTTATAAGC GCTCTACCTAATGGCGGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MSLYISIDPGMKKCGLLLADMQSGEVIEACVASLNKFSDLVSQWNEDHEIIKIIIGNGTNCKYIENKLKRNNSFNINYVN ERGSTLRARFRYWEIWPPNYFIRWLPKEILFPPANLDAIVALILLEDFLKYRLIWPSKVNIKTWP
Sequences:
>Translated_145_residues MSLYISIDPGMKKCGLLLADMQSGEVIEACVASLNKFSDLVSQWNEDHEIIKIIIGNGTNCKYIENKLKRNNSFNINYVN ERGSTLRARFRYWEIWPPNYFIRWLPKEILFPPANLDAIVALILLEDFLKYRLIWPSKVNIKTWP >Mature_144_residues SLYISIDPGMKKCGLLLADMQSGEVIEACVASLNKFSDLVSQWNEDHEIIKIIIGNGTNCKYIENKLKRNNSFNINYVNE RGSTLRARFRYWEIWPPNYFIRWLPKEILFPPANLDAIVALILLEDFLKYRLIWPSKVNIKTWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16966; Mature: 16835
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYISIDPGMKKCGLLLADMQSGEVIEACVASLNKFSDLVSQWNEDHEIIKIIIGNGTN CEEEEEECCCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC CKYIENKLKRNNSFNINYVNERGSTLRARFRYWEIWPPNYFIRWLPKEILFPPANLDAIV CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEECCCCCEEEECCHHHCCCCCCHHHHH ALILLEDFLKYRLIWPSKVNIKTWP HHHHHHHHHHHEEECCCCCCEEECC >Mature Secondary Structure SLYISIDPGMKKCGLLLADMQSGEVIEACVASLNKFSDLVSQWNEDHEIIKIIIGNGTN EEEEEECCCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC CKYIENKLKRNNSFNINYVNERGSTLRARFRYWEIWPPNYFIRWLPKEILFPPANLDAIV CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEEEEECCCCCEEEECCHHHCCCCCCHHHHH ALILLEDFLKYRLIWPSKVNIKTWP HHHHHHHHHHHEEECCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA