| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024931
Identifier: 124024931
GI number: 124024931
Start: 202617
End: 203276
Strand: Direct
Name: 124024931
Synonym: NATL1_02181
Alternate gene names: NA
Gene position: 202617-203276 (Clockwise)
Preceding gene: 124024930
Following gene: 124024933
Centisome position: 10.87
GC content: 39.55
Gene sequence:
>660_bases ATGAATCAAGGTCCTTATAATCGAAGACCATCATCTCGTAGAAGATCAGATTTGGCGAGAAGACAAGAAGGGAACAGATT TAATTCTAGAAAAGATTCAAATGTTAGAGACCAATATGAATTAAGAGGAAGTCGATTTGAATCGTCAGGTCCCTCAGGTG GAGGCGGTGGTGGTATAAAAATAAACTCTAATTCAATTGCCATTTTGGCTGGAGTATTGGTAATTGGCGTTGGTATAGGA AGCCTCATCACAAGCACAACTTCAGGTGGCCAGGGGAATATAGCAAGTCAGCAACAATTGGATATGGCAGTTCCGGATCC CGACTTTTGCAGGCAATACGGTGCAAGCGCCTTTGTGATCGATGTTGAAATGTATACGACCTTAAACCCCTCTACAAGCT TTGTGACACAACCTGCTCTTCAGCCTGGTTGTGTCATTAGAAGAGAAAATTGGACTGTTTTACAAAAGCAAGGAGCCATA AATAATGAAGATGTTAGAGAATGTAAGCAGAGAATGAATACATTTGCCTATATAGGTTCAATTAGGGACCAGCCAATTGT GCGCTGCGTTTATCAAGCAGATGTTAATGAAAATAAATTTATAATTAGAGGTGCTGAAGAAGATGCTGTTGGTATAAATA AAGAGGCTATACAATTTTAA
Upstream 100 bases:
>100_bases ATTTTATTAGAAAGTTGCTCAAAGATGGAGAGCTCAGTTATAACCCAAATAGTAGGGTAATGAACTATTCCATGGGATTA CCTAGAACTCAAGAATTATT
Downstream 100 bases:
>100_bases TTTTGAGGATTAAATAGTGGTGAAAATGAACTAGCAAATAGAGGTAATATGTCTCGTGTGAATGCTTCTGCAGCTCTAGA TGAATATCTGCCAGGATTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MNQGPYNRRPSSRRRSDLARRQEGNRFNSRKDSNVRDQYELRGSRFESSGPSGGGGGGIKINSNSIAILAGVLVIGVGIG SLITSTTSGGQGNIASQQQLDMAVPDPDFCRQYGASAFVIDVEMYTTLNPSTSFVTQPALQPGCVIRRENWTVLQKQGAI NNEDVRECKQRMNTFAYIGSIRDQPIVRCVYQADVNENKFIIRGAEEDAVGINKEAIQF
Sequences:
>Translated_219_residues MNQGPYNRRPSSRRRSDLARRQEGNRFNSRKDSNVRDQYELRGSRFESSGPSGGGGGGIKINSNSIAILAGVLVIGVGIG SLITSTTSGGQGNIASQQQLDMAVPDPDFCRQYGASAFVIDVEMYTTLNPSTSFVTQPALQPGCVIRRENWTVLQKQGAI NNEDVRECKQRMNTFAYIGSIRDQPIVRCVYQADVNENKFIIRGAEEDAVGINKEAIQF >Mature_219_residues MNQGPYNRRPSSRRRSDLARRQEGNRFNSRKDSNVRDQYELRGSRFESSGPSGGGGGGIKINSNSIAILAGVLVIGVGIG SLITSTTSGGQGNIASQQQLDMAVPDPDFCRQYGASAFVIDVEMYTTLNPSTSFVTQPALQPGCVIRRENWTVLQKQGAI NNEDVRECKQRMNTFAYIGSIRDQPIVRCVYQADVNENKFIIRGAEEDAVGINKEAIQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24041; Mature: 24041
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQGPYNRRPSSRRRSDLARRQEGNRFNSRKDSNVRDQYELRGSRFESSGPSGGGGGGIK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEE INSNSIAILAGVLVIGVGIGSLITSTTSGGQGNIASQQQLDMAVPDPDFCRQYGASAFVI ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCEEEE DVEMYTTLNPSTSFVTQPALQPGCVIRRENWTVLQKQGAINNEDVRECKQRMNTFAYIGS EEEEEEECCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC IRDQPIVRCVYQADVNENKFIIRGAEEDAVGINKEAIQF CCCCHHEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCC >Mature Secondary Structure MNQGPYNRRPSSRRRSDLARRQEGNRFNSRKDSNVRDQYELRGSRFESSGPSGGGGGGIK CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEE INSNSIAILAGVLVIGVGIGSLITSTTSGGQGNIASQQQLDMAVPDPDFCRQYGASAFVI ECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCEEEE DVEMYTTLNPSTSFVTQPALQPGCVIRRENWTVLQKQGAINNEDVRECKQRMNTFAYIGS EEEEEEECCCCCCEEECCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC IRDQPIVRCVYQADVNENKFIIRGAEEDAVGINKEAIQF CCCCHHEEEEEECCCCCCEEEEECCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA