| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124024933
Identifier: 124024933
GI number: 124024933
Start: 204332
End: 205078
Strand: Direct
Name: 124024933
Synonym: NATL1_02201
Alternate gene names: NA
Gene position: 204332-205078 (Clockwise)
Preceding gene: 124024931
Following gene: 124024934
Centisome position: 10.96
GC content: 36.41
Gene sequence:
>747_bases ATGACACTTTCAGATACTCATGGTTCGAGTTTTGTAATGATATTACTTTTATTTTGTTTTGCAGTTATTCATAGTGGTGG AGCGGCTTTAAGGGTGAAAGCAGAAAGTGTAATTGGAGCAAGAGCATGGAGATTGATTTTTGCTTTTGCAAGTATTCCTT CAGCTGTCATCTTGGTTGGTTACTTTATTGCTCATCGTTATGACGGAGTGAGATTTTGGAATTTTCAAGGGATTAGCGAA TTAATCCCTGTGATTTGGATTTTGAGTGCAATTAGTTTTCTTTTTTTATACCCAGCCACATACAACCTTTTAGAAATCCC GGCTGTCTTGAAGCCAAAAGTTAGAATTTACGCCTCAGGAATTATTAGAGTAACTCGCCATCCCCAGGCAATTGGGCAAA TTATTTGGTGCTTTGCACATTTACTTTGGATTGGTACAAGTTTTACACTTGTAACTTGTGTTGGATTGATTGCCCACCAT TTATTTGCTATTTGGCATGGTGATAGAAGACTTACTCTCAGATTCGGAAAAGAATTTGATGAAATCAAGAAAAAAACATC AGTCGTTCCCTTTTTAGCTGTTTTGGATGGACGACAAAAATTACAAATAAAAGAATTTCTCAGGCCCTCTCAAATGGGGA TTCTCATTGCAATATTTTTTTTCTGGTGGTCCCATAAATTTATTTCCGTTGGAGCTCAGAGATTTCTCTCTTTTGATTTA ACTGAATTACTAGCAAGAATTGCCTAA
Upstream 100 bases:
>100_bases GCCTTCATGGCAGTTATTAAAATAAAATGTAGGGAAAAACAACTCGAACTGTTGGTCCGGTATGGATCTAATAATTTATT AAGAGGTTTTTATACGACTA
Downstream 100 bases:
>100_bases ACTTATCTCAATATGATTTAGCTGGATGCATTCGGCTGCAGATTTTGCTTGGTTAATCCCACTTCTTCCACTTTGTGGGG CAGTTTTAATTGGTTTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTLSDTHGSSFVMILLLFCFAVIHSGGAALRVKAESVIGARAWRLIFAFASIPSAVILVGYFIAHRYDGVRFWNFQGISE LIPVIWILSAISFLFLYPATYNLLEIPAVLKPKVRIYASGIIRVTRHPQAIGQIIWCFAHLLWIGTSFTLVTCVGLIAHH LFAIWHGDRRLTLRFGKEFDEIKKKTSVVPFLAVLDGRQKLQIKEFLRPSQMGILIAIFFFWWSHKFISVGAQRFLSFDL TELLARIA
Sequences:
>Translated_248_residues MTLSDTHGSSFVMILLLFCFAVIHSGGAALRVKAESVIGARAWRLIFAFASIPSAVILVGYFIAHRYDGVRFWNFQGISE LIPVIWILSAISFLFLYPATYNLLEIPAVLKPKVRIYASGIIRVTRHPQAIGQIIWCFAHLLWIGTSFTLVTCVGLIAHH LFAIWHGDRRLTLRFGKEFDEIKKKTSVVPFLAVLDGRQKLQIKEFLRPSQMGILIAIFFFWWSHKFISVGAQRFLSFDL TELLARIA >Mature_247_residues TLSDTHGSSFVMILLLFCFAVIHSGGAALRVKAESVIGARAWRLIFAFASIPSAVILVGYFIAHRYDGVRFWNFQGISEL IPVIWILSAISFLFLYPATYNLLEIPAVLKPKVRIYASGIIRVTRHPQAIGQIIWCFAHLLWIGTSFTLVTCVGLIAHHL FAIWHGDRRLTLRFGKEFDEIKKKTSVVPFLAVLDGRQKLQIKEFLRPSQMGILIAIFFFWWSHKFISVGAQRFLSFDLT ELLARIA
Specific function: Unknown
COG id: COG4094
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28168; Mature: 28037
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSDTHGSSFVMILLLFCFAVIHSGGAALRVKAESVIGARAWRLIFAFASIPSAVILVG CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH YFIAHRYDGVRFWNFQGISELIPVIWILSAISFLFLYPATYNLLEIPAVLKPKVRIYASG HHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCEEEEHH IIRVTRHPQAIGQIIWCFAHLLWIGTSFTLVTCVGLIAHHLFAIWHGDRRLTLRFGKEFD HEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH EIKKKTSVVPFLAVLDGRQKLQIKEFLRPSQMGILIAIFFFWWSHKFISVGAQRFLSFDL HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELLARIA HHHHHHCC >Mature Secondary Structure TLSDTHGSSFVMILLLFCFAVIHSGGAALRVKAESVIGARAWRLIFAFASIPSAVILVG CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH YFIAHRYDGVRFWNFQGISELIPVIWILSAISFLFLYPATYNLLEIPAVLKPKVRIYASG HHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHCCCCEEEEHH IIRVTRHPQAIGQIIWCFAHLLWIGTSFTLVTCVGLIAHHLFAIWHGDRRLTLRFGKEFD HEEEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHH EIKKKTSVVPFLAVLDGRQKLQIKEFLRPSQMGILIAIFFFWWSHKFISVGAQRFLSFDL HHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TELLARIA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA