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The map label for this gene is yfcH [C]

Identifier: 124024905

GI number: 124024905

Start: 179159

End: 180088

Strand: Reverse

Name: yfcH [C]

Synonym: NATL1_01921

Alternate gene names: 124024905

Gene position: 180088-179159 (Counterclockwise)

Preceding gene: 124024907

Following gene: 124024902

Centisome position: 9.66

GC content: 37.74

Gene sequence:

>930_bases
ATGAAATTACTACTCACTGGATGTACTGGTTTTATCGGGAGAGAATTAATTCCATTGCTCATTAATGAAGGACATAGCCT
CACAGTCATATCGAGACAATCACAAGGAAAAGTTCAAACTATAGCTAATGACCAAAACATCAATTTCATACAAATGAATC
CAGCTGAGTCCTCGTCTTGGGATAAAGAAGAAATTCAAAACTCTCTTAAAAGTTGCGAAGGGGTTATCAATCTTGCTGGC
GAACCTATTGCTGAAAAAAGATGGACTACCGATCATTGTAAAGAAATTACAAATAGTCGCATAGAGACAACAAAAAATCT
GATTAAAAGCCTACGGAATCTAAGAAAATCCCCAAAAGTTCTTATTAATGCCTCAGCTATTGGTTTCTATGGTTCACATC
CTCAGACTGAATTCACTGAAGAAAATATTCCCGGTAATGATTTCCTCGCAAATTTGTGCAAAGAATGGGAATCTATTGCA
AAAAACAAGCCAAGAGCAACTCGGCTGTTAATTGTAAGAATTGGAATTGTATTAGCTAAAGACGGTGGAGCACTTGGGAA
AATGCTTCCCATCTTTAGAGCCGGCCTTGGAGGCCCTATAGGAGATGGCAAACAATGGATGAGTTGGATACATAGAACAG
ATCTTTGTAATCTCATCAACGCAAGTATAAAAAATTCTGCTTGGTCAGGAGTGGTTAATGGAGTTGCACCAAATCCTGTA
AGAATGAATGAGTTCTCTAATTCACTTGGTCAAGTACTTGGTAGACCAAGTCTTCTCGCAGTTCCTGGGCCAGTATTGAA
ATTAATTTTAGGAGATGGAGCTCGTGTAGTTTTGGAGGGACAAAATGTCAAACCACAAAGATTGAATAAACTCAAATTTA
AATTCAGTTTCCCCGCTATTAATGACGCTTTTCAATCAATATTAGCGTAA

Upstream 100 bases:

>100_bases
ATTAATTAAATGCAAATTCCATAACGCAAATATTCGTGATGGATCAACACCATAAGTTAATCAAATCCCCCTAAGCTGAT
CAAATCTGTTTAGAGAAATC

Downstream 100 bases:

>100_bases
AATTTTTTAATGAAATCTAATCAAAATCACAGGTCTAACCAATTTTTTATTTTAATTAATGTTTTCCAATTAGGTTTTCG
TGAAAGACCATCTTCAAATG

Product: putative cell division inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKLLLTGCTGFIGRELIPLLINEGHSLTVISRQSQGKVQTIANDQNINFIQMNPAESSSWDKEEIQNSLKSCEGVINLAG
EPIAEKRWTTDHCKEITNSRIETTKNLIKSLRNLRKSPKVLINASAIGFYGSHPQTEFTEENIPGNDFLANLCKEWESIA
KNKPRATRLLIVRIGIVLAKDGGALGKMLPIFRAGLGGPIGDGKQWMSWIHRTDLCNLINASIKNSAWSGVVNGVAPNPV
RMNEFSNSLGQVLGRPSLLAVPGPVLKLILGDGARVVLEGQNVKPQRLNKLKFKFSFPAINDAFQSILA

Sequences:

>Translated_309_residues
MKLLLTGCTGFIGRELIPLLINEGHSLTVISRQSQGKVQTIANDQNINFIQMNPAESSSWDKEEIQNSLKSCEGVINLAG
EPIAEKRWTTDHCKEITNSRIETTKNLIKSLRNLRKSPKVLINASAIGFYGSHPQTEFTEENIPGNDFLANLCKEWESIA
KNKPRATRLLIVRIGIVLAKDGGALGKMLPIFRAGLGGPIGDGKQWMSWIHRTDLCNLINASIKNSAWSGVVNGVAPNPV
RMNEFSNSLGQVLGRPSLLAVPGPVLKLILGDGARVVLEGQNVKPQRLNKLKFKFSFPAINDAFQSILA
>Mature_309_residues
MKLLLTGCTGFIGRELIPLLINEGHSLTVISRQSQGKVQTIANDQNINFIQMNPAESSSWDKEEIQNSLKSCEGVINLAG
EPIAEKRWTTDHCKEITNSRIETTKNLIKSLRNLRKSPKVLINASAIGFYGSHPQTEFTEENIPGNDFLANLCKEWESIA
KNKPRATRLLIVRIGIVLAKDGGALGKMLPIFRAGLGGPIGDGKQWMSWIHRTDLCNLINASIKNSAWSGVVNGVAPNPV
RMNEFSNSLGQVLGRPSLLAVPGPVLKLILGDGARVVLEGQNVKPQRLNKLKFKFSFPAINDAFQSILA

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=314, Percent_Identity=36.3057324840764, Blast_Score=202, Evalue=4e-52,
Organism=Escherichia coli, GI1788642, Length=309, Percent_Identity=39.4822006472492, Blast_Score=230, Evalue=9e-62,
Organism=Drosophila melanogaster, GI28573846, Length=307, Percent_Identity=33.5504885993485, Blast_Score=158, Evalue=5e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 33857; Mature: 33857

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLTGCTGFIGRELIPLLINEGHSLTVISRQSQGKVQTIANDQNINFIQMNPAESSSW
CEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCC
DKEEIQNSLKSCEGVINLAGEPIAEKRWTTDHCKEITNSRIETTKNLIKSLRNLRKSPKV
CHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LINASAIGFYGSHPQTEFTEENIPGNDFLANLCKEWESIAKNKPRATRLLIVRIGIVLAK
EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEEEEC
DGGALGKMLPIFRAGLGGPIGDGKQWMSWIHRTDLCNLINASIKNSAWSGVVNGVAPNPV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCE
RMNEFSNSLGQVLGRPSLLAVPGPVLKLILGDGARVVLEGQNVKPQRLNKLKFKFSFPAI
EHHHHHHHHHHHHCCCCEEECCCHHHHHEECCCCEEEEECCCCCHHHHHEEEEEEECCCH
NDAFQSILA
HHHHHHHCC
>Mature Secondary Structure
MKLLLTGCTGFIGRELIPLLINEGHSLTVISRQSQGKVQTIANDQNINFIQMNPAESSSW
CEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCC
DKEEIQNSLKSCEGVINLAGEPIAEKRWTTDHCKEITNSRIETTKNLIKSLRNLRKSPKV
CHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LINASAIGFYGSHPQTEFTEENIPGNDFLANLCKEWESIAKNKPRATRLLIVRIGIVLAK
EEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEEEEEEEEEC
DGGALGKMLPIFRAGLGGPIGDGKQWMSWIHRTDLCNLINASIKNSAWSGVVNGVAPNPV
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCE
RMNEFSNSLGQVLGRPSLLAVPGPVLKLILGDGARVVLEGQNVKPQRLNKLKFKFSFPAI
EHHHHHHHHHHHHCCCCEEECCCHHHHHEECCCCEEEEECCCCCHHHHHEEEEEEECCCH
NDAFQSILA
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]