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The map label for this gene is cbpA [C]

Identifier: 124024907

GI number: 124024907

Start: 180560

End: 181213

Strand: Reverse

Name: cbpA [C]

Synonym: NATL1_01941

Alternate gene names: 124024907

Gene position: 181213-180560 (Counterclockwise)

Preceding gene: 124024908

Following gene: 124024905

Centisome position: 9.72

GC content: 29.82

Gene sequence:

>654_bases
ATGAGCAAAGACCCATATCAAATTTTGAAAGTTTATCCCAGCGCAAAACTAGAAGAGATTAAAAAAGCATACAGAAAACT
TGTAAAAATACATCACCCAGACAAAGGAGGAGATGCAGCAGTAATGCTCGAAATAAACTCAGCATGGGAAATATTAAAGA
AAAAACATAAAGATCTGAATTTAAATAAAGTTAATAATTCAAAACTTTATAATCAAAATGAATATAAAAGAGAAGCTAAT
AATCACTCTAAACCTGAAGATTTAAAAAAATGGTTTCAGAATATATACCTCCCTATTGATAAATTACTAGGACAGATAAT
TAATCCTCTGGGTGCAAAAATAAGAGATTTATCAGCTGATCCTTATGATGAAATATTAATGGATTCTTTCTGCCTCTATC
TAGAGCAAAGTAAAAATAAAATAACTAAGATTAAAAAAATTTATACATCTTTTGCATGTCCCTCAATCATAAGAGATTTC
AGCTTGGATCTATATCATTGCTTATCACATGTTGAGGATGGTATTAATGAATTGGAGCGTTACACAATGGGTTATGTAGA
CAATTACCTTCACGACGGAAAGGCAATGATTGCTTTTGCTAAGAAAAAAAGGAAATTTTTACAAAGTAATAAAAAAGAAT
GGCTTCACTTATAG

Upstream 100 bases:

>100_bases
GTTTTGGTGAAAGATATCTATCAACAACAATGTTTACTTCTATCCCCGCAAAGCCAGTAAAAGGGAATGAGTTTCTCTAA
CAAGAAATAATCTTTCAACA

Downstream 100 bases:

>100_bases
TTTCAATTTTAATTATGTATTAATATGAGACTATATGATCAGAATTCATCCAAACATCAGGGACTGGTCTCCTCCATCTA
ACTTGACAGTAATCACCTTT

Product: putative heat shock protein DnaJ

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ-Class Molecular Chaperone; DNAJ Domain Protein; DNAJ Domain-Containing Protein; Molecular Chaperone; DNAJ Family Protein; Heat Shock Protein DNAJ-Like Protein; DNAJ-Like Protein

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MSKDPYQILKVYPSAKLEEIKKAYRKLVKIHHPDKGGDAAVMLEINSAWEILKKKHKDLNLNKVNNSKLYNQNEYKREAN
NHSKPEDLKKWFQNIYLPIDKLLGQIINPLGAKIRDLSADPYDEILMDSFCLYLEQSKNKITKIKKIYTSFACPSIIRDF
SLDLYHCLSHVEDGINELERYTMGYVDNYLHDGKAMIAFAKKKRKFLQSNKKEWLHL

Sequences:

>Translated_217_residues
MSKDPYQILKVYPSAKLEEIKKAYRKLVKIHHPDKGGDAAVMLEINSAWEILKKKHKDLNLNKVNNSKLYNQNEYKREAN
NHSKPEDLKKWFQNIYLPIDKLLGQIINPLGAKIRDLSADPYDEILMDSFCLYLEQSKNKITKIKKIYTSFACPSIIRDF
SLDLYHCLSHVEDGINELERYTMGYVDNYLHDGKAMIAFAKKKRKFLQSNKKEWLHL
>Mature_216_residues
SKDPYQILKVYPSAKLEEIKKAYRKLVKIHHPDKGGDAAVMLEINSAWEILKKKHKDLNLNKVNNSKLYNQNEYKREANN
HSKPEDLKKWFQNIYLPIDKLLGQIINPLGAKIRDLSADPYDEILMDSFCLYLEQSKNKITKIKKIYTSFACPSIIRDFS
LDLYHCLSHVEDGINELERYTMGYVDNYLHDGKAMIAFAKKKRKFLQSNKKEWLHL

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25493; Mature: 25362

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDPYQILKVYPSAKLEEIKKAYRKLVKIHHPDKGGDAAVMLEINSAWEILKKKHKDLN
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCCC
LNKVNNSKLYNQNEYKREANNHSKPEDLKKWFQNIYLPIDKLLGQIINPLGAKIRDLSAD
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PYDEILMDSFCLYLEQSKNKITKIKKIYTSFACPSIIRDFSLDLYHCLSHVEDGINELER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTMGYVDNYLHDGKAMIAFAKKKRKFLQSNKKEWLHL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCC
>Mature Secondary Structure 
SKDPYQILKVYPSAKLEEIKKAYRKLVKIHHPDKGGDAAVMLEINSAWEILKKKHKDLN
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHHHHCCCC
LNKVNNSKLYNQNEYKREANNHSKPEDLKKWFQNIYLPIDKLLGQIINPLGAKIRDLSAD
CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
PYDEILMDSFCLYLEQSKNKITKIKKIYTSFACPSIIRDFSLDLYHCLSHVEDGINELER
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YTMGYVDNYLHDGKAMIAFAKKKRKFLQSNKKEWLHL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA