Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024877

Identifier: 124024877

GI number: 124024877

Start: 157923

End: 158252

Strand: Reverse

Name: 124024877

Synonym: NATL1_01641

Alternate gene names: NA

Gene position: 158252-157923 (Counterclockwise)

Preceding gene: 124024878

Following gene: 124024871

Centisome position: 8.49

GC content: 34.24

Gene sequence:

>330_bases
ATGAATAAGCCATCTTCATTGATTTGGATGGTATTTATTCTACTTATTATTTTACCTACACCAGCTGGGAAATTCATTAT
TGATTTAGCAGGCGGAATATTCCTTATCATTACAATAATACCATTAGTCTTAGGAGGAGTTGGATGGTTTACTTGGAAAA
GAATCCAATCAAAAGTACAAACCTGTGAAGCTTGTGGCTCAACCTTTCTTAACAGTCAAATGATTTGTCCAATATGTGGA
ACACCCATAACAAAAAACGCGGACATTCTAGAAAATATTCCAGCAAGTGCAGCAACAATTGACATAAAATCCGAGGAATT
AGATTTATAA

Upstream 100 bases:

>100_bases
TTGTAATTGCAAGCATGCGTCGAAATCGATACGTTTAAACATCATTGAAACAAGCACCTAAATTTAAATTATAATATTTA
AATAAATTTCTTAAGTAGTC

Downstream 100 bases:

>100_bases
ATTAATCTAATTCTAAAAATTCTGGATTAATTTCATTAATCTCTTGTTCACAAAACTGCAAGAGTTCTTCGCAATGCTTA
AGAAGTAGATGACCTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MNKPSSLIWMVFILLIILPTPAGKFIIDLAGGIFLIITIIPLVLGGVGWFTWKRIQSKVQTCEACGSTFLNSQMICPICG
TPITKNADILENIPASAATIDIKSEELDL

Sequences:

>Translated_109_residues
MNKPSSLIWMVFILLIILPTPAGKFIIDLAGGIFLIITIIPLVLGGVGWFTWKRIQSKVQTCEACGSTFLNSQMICPICG
TPITKNADILENIPASAATIDIKSEELDL
>Mature_109_residues
MNKPSSLIWMVFILLIILPTPAGKFIIDLAGGIFLIITIIPLVLGGVGWFTWKRIQSKVQTCEACGSTFLNSQMICPICG
TPITKNADILENIPASAATIDIKSEELDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11818; Mature: 11818

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPSSLIWMVFILLIILPTPAGKFIIDLAGGIFLIITIIPLVLGGVGWFTWKRIQSKVQ
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TCEACGSTFLNSQMICPICGTPITKNADILENIPASAATIDIKSEELDL
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MNKPSSLIWMVFILLIILPTPAGKFIIDLAGGIFLIITIIPLVLGGVGWFTWKRIQSKVQ
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
TCEACGSTFLNSQMICPICGTPITKNADILENIPASAATIDIKSEELDL
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA