The gene/protein map for NC_008819 is currently unavailable.
Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

Click here to switch to the map view.

The map label for this gene is 124024876

Identifier: 124024876

GI number: 124024876

Start: 157670

End: 157921

Strand: Direct

Name: 124024876

Synonym: NATL1_01631

Alternate gene names: NA

Gene position: 157670-157921 (Clockwise)

Preceding gene: 124024875

Following gene: 124024883

Centisome position: 8.46

GC content: 24.6

Gene sequence:

>252_bases
ATGTCTAACAAAGTTACTAACAAAAAAAATATAGAAATCTTTAAACAAGATATTAATAGATTAAGTTATGAAGAATCTAT
ATCTGCATTGGAAACTATCTTAAACAATGTGCAAGATGAAAATATTTCATTGGATGAAATTCAGATTAATTATATTAAAG
GTCATCTACTTCTTAAGCATTGCGAAGAACTCTTGCAGTTTTGTGAACAAGAGATTAATGAAATTAATCCAGAATTTTTA
GAATTAGATTAA

Upstream 100 bases:

>100_bases
AGAGGTTGATAGTCTTAATTATGATAAAATATAAATTTATTGAATAAAAATTTGTTATTACATTCCAATTGAAAATCAAG
TTATCCCAAATCATTTATCA

Downstream 100 bases:

>100_bases
TTTATAAATCTAATTCCTCGGATTTTATGTCAATTGTTGCTGCACTTGCTGGAATATTTTCTAGAATGTCCGCGTTTTTT
GTTATGGGTGTTCCACATAT

Product: exodeoxyribonuclease VII

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MSNKVTNKKNIEIFKQDINRLSYEESISALETILNNVQDENISLDEIQINYIKGHLLLKHCEELLQFCEQEINEINPEFL
ELD

Sequences:

>Translated_83_residues
MSNKVTNKKNIEIFKQDINRLSYEESISALETILNNVQDENISLDEIQINYIKGHLLLKHCEELLQFCEQEINEINPEFL
ELD
>Mature_82_residues
SNKVTNKKNIEIFKQDINRLSYEESISALETILNNVQDENISLDEIQINYIKGHLLLKHCEELLQFCEQEINEINPEFLE
LD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9794; Mature: 9663

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKVTNKKNIEIFKQDINRLSYEESISALETILNNVQDENISLDEIQINYIKGHLLLKH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
CEELLQFCEQEINEINPEFLELD
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SNKVTNKKNIEIFKQDINRLSYEESISALETILNNVQDENISLDEIQINYIKGHLLLKH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
CEELLQFCEQEINEINPEFLELD
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA