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The map label for this gene is sufD [C]

Identifier: 124024848

GI number: 124024848

Start: 131940

End: 133178

Strand: Reverse

Name: sufD [C]

Synonym: NATL1_01351

Alternate gene names: 124024848

Gene position: 133178-131940 (Counterclockwise)

Preceding gene: 124024849

Following gene: 124024847

Centisome position: 7.14

GC content: 32.45

Gene sequence:

>1239_bases
ATGAAATCATCAACTATTTGCCAAGATTGGCTTGACTCTCTTCCTCTAACTGATGGTTATTTAAAAAACGAACAATCAAT
AGGACGAGAATTTCTCCTAGAGAAAGGGATGCCCTCCAAGAAAGATGAAGCGTGGCGATTATCCAACTTCAATAAGTTAA
ATAGTTTTTTATCGTTACCAACGATTATCGATAGCAAAGGTATTAAATCTGTCTTTCCAGAAAAGGATGAAAATAGAGAA
AGAATTATAATTAATCCTAATGAAAATCCAATTTTAAATATTAATTTACCTAATGGAATTGAAGAGCTAAATAAAAAAGA
GATTGAAGAGAATCTAGGTGAAATAATTAAGTCAACTAATATAAAGAATGACATATCAGTCTGTCTTAATCAGGCATCTA
GCTTAGAGGTATTAGCTTTAAAAGTTAAGCGTAATCACAACCATTCATTAGAGTTAGTAATTCCATCGATAGAGGAAAAG
TCAATCTCAACTAGAATATTTTTCCTCATAGAAGAAGGAGCAAAATTAGATCTTTTACAAATTTTTCTAGGTAAAAATAA
TTCAGCTCAAAATCATTTAATAGAAATAAAACTAGAAGCCCAAGCAGAGTTTACTCATGGGTTTATTTCTTTAGGTGAAG
AGAAAGAATCCTCCTCAATTTGTACTTTAGCTGTAGATCAATCAGAAAAGAGTAAATATTCTCTACATTCAATTCATCAT
GGTTGGGATTATGCCCGTTTTGAACCAAGAATAATTCAAAGTGAAGGAGAAGCTTCAACAACTATCAAAGGGCTGCAAGT
CACCAAATCAAAAGAGCAAATAGCTACGCACTCTTTGATTAGATTTGAAGGCCCAAATGGAAAGCTTGATCAATTACAAA
AAGCAGTAGCATCTGAATATTCACATTGCATTTTCAATGGTTCGATTGAAGTTCCTCAAAAAGCACAAAAAACAGAAGCT
GCTCAGCTAAGTAGAAATTTATTACTTTCTAAACGCGCCAGAATAGATACAAAACCAGAGCTTGAGATAGTTGCTGATGA
CGTTAGGTGTACTCATGGAGCGACTGTAAGCCAACTTCAAGATGAGGAATTATTTTATTTACTAAGTAGAGGTATTGATA
AGCAATGTGCTAATTCTTTATTATTACAAGGATATTATGATGAAGTGATTTCACACTTTCCTAAAAGTGCTGGCAAATGG
AACTTTATTGAAAAATTAATACAAGACATAAAAAAGTGA

Upstream 100 bases:

>100_bases
GAAAAATAATAAAAACTGGCAACAAAGAACTAGCAATTGACCTTGAGAAATCAGGATATGACTGTATTGACAAAAATACC
AAAGAGAAGGAAATAGCAAA

Downstream 100 bases:

>100_bases
ACAATTTAGTAAAAAATATTGCTGAAAAAAGTAGAAATGATTTCCCATTATTTAATAGAGATATTAATAAAAATTTAATA
TATTTAGATCATGCAGCGAC

Product: ABC transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKSSTICQDWLDSLPLTDGYLKNEQSIGREFLLEKGMPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDENRE
RIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTNIKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEK
SISTRIFFLIEEGAKLDLLQIFLGKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHH
GWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEA
AQLSRNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFPKSAGKW
NFIEKLIQDIKK

Sequences:

>Translated_412_residues
MKSSTICQDWLDSLPLTDGYLKNEQSIGREFLLEKGMPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDENRE
RIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTNIKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEK
SISTRIFFLIEEGAKLDLLQIFLGKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHH
GWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEA
AQLSRNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFPKSAGKW
NFIEKLIQDIKK
>Mature_412_residues
MKSSTICQDWLDSLPLTDGYLKNEQSIGREFLLEKGMPSKKDEAWRLSNFNKLNSFLSLPTIIDSKGIKSVFPEKDENRE
RIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTNIKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEK
SISTRIFFLIEEGAKLDLLQIFLGKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHH
GWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEYSHCIFNGSIEVPQKAQKTEA
AQLSRNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQDEELFYLLSRGIDKQCANSLLLQGYYDEVISHFPKSAGKW
NFIEKLIQDIKK

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=377, Percent_Identity=27.0557029177719, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46556; Mature: 46556

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSTICQDWLDSLPLTDGYLKNEQSIGREFLLEKGMPSKKDEAWRLSNFNKLNSFLSLP
CCCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCC
TIIDSKGIKSVFPEKDENRERIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTN
HHHCCCCCHHHCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
IKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEKSISTRIFFLIEEGAKLDLLQ
CCHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEE
IFLGKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHH
EEECCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC
GWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEY
CCCCCCCCCEEECCCCCCCCEEECEEEECCHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
SHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQ
HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHC
DEELFYLLSRGIDKQCANSLLLQGYYDEVISHFPKSAGKWNFIEKLIQDIKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKSSTICQDWLDSLPLTDGYLKNEQSIGREFLLEKGMPSKKDEAWRLSNFNKLNSFLSLP
CCCCCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHCCC
TIIDSKGIKSVFPEKDENRERIIINPNENPILNINLPNGIEELNKKEIEENLGEIIKSTN
HHHCCCCCHHHCCCCCCCCCEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
IKNDISVCLNQASSLEVLALKVKRNHNHSLELVIPSIEEKSISTRIFFLIEEGAKLDLLQ
CCHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEEEEECCCCEEEEE
IFLGKNNSAQNHLIEIKLEAQAEFTHGFISLGEEKESSSICTLAVDQSEKSKYSLHSIHH
EEECCCCCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHC
GWDYARFEPRIIQSEGEASTTIKGLQVTKSKEQIATHSLIRFEGPNGKLDQLQKAVASEY
CCCCCCCCCEEECCCCCCCCEEECEEEECCHHHHHHHHEEEEECCCCHHHHHHHHHHHHH
SHCIFNGSIEVPQKAQKTEAAQLSRNLLLSKRARIDTKPELEIVADDVRCTHGATVSQLQ
HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHC
DEELFYLLSRGIDKQCANSLLLQGYYDEVISHFPKSAGKWNFIEKLIQDIKK
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]