Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024754

Identifier: 124024754

GI number: 124024754

Start: 42106

End: 42969

Strand: Direct

Name: 124024754

Synonym: NATL1_00411

Alternate gene names: NA

Gene position: 42106-42969 (Clockwise)

Preceding gene: 124024750

Following gene: 124024759

Centisome position: 2.26

GC content: 32.41

Gene sequence:

>864_bases
ATGAAACATATTCCATTAAAAACCATTCAACTTAAGAACCATCAGGTCTTAAATGAAAGATGGTTACAGGACATAATTGC
CGAGGATCCTTCCATAATTGGCATTGGAGATGTAATTCTCAAAGATAAAGAAAGAATTCATCAGGGTGCAGGAAGACTGG
ATCTATTGCTTCAAGATGCAGATGGTATTGAAAGGTATGAAGTAGAAATTCAACTAGGAGCAACTGATGAATCTCATATT
ATTAGAACTATTGAATATTGGGATATTGAAAGGAAAAGATACCCTCAGTACAACCACACTGCAATAATCATTGCTGAAGA
TATTACGAGTCGTTTTTTAAATGTAATTAGTTTGTTTAATGGATCTATTCCATTAATGGCGATTCAAGTATGTGCTATTC
AAACTGCAGAAGGGGTTGGACTCCATTTCACCAAAGTACTTGATGTACAACAATTAGGATTAGTTGATGAGGATGAGGAA
GTCGCAGAAGTCACTAATAGAGATTATTGGTTGAAGCGTGGCACACCAAAAACAGTAGCAATGGCAGATAAACTTCTTTC
TTATATTCATGAGTTTGACCATGATGCAGAATTGAACTACAACAAGTTTTATATAGGACTAAAAATTAATAGCAGATCTA
AAAATTATGCAATCTTTCGACCTAAAAAGAATTTCATAGGTTTAGAAATTAAAATGCCACAAACTGAAGAGAATGATGAA
ATAATAAATCAAGCAGAAATTGCTAATTTAGATTATTCCAAAAGATATGGATATTATCGACTAAGCATTTATGAAAGAGA
TTTAGAAGAAAAATCAGACTTTATCAAGAAATTACTTCTTGATGCAAAAGAAAGATTTGGTTAA

Upstream 100 bases:

>100_bases
TCATGTATTTTATTTCATGGGGATCTAAGTTTAATTTACTTTGACTTAGTAATTAATTTTTACTTTAAGTTCTACAATTA
ATTAAAAGGTTTTTGAAAAA

Downstream 100 bases:

>100_bases
AATTATTAAATGATAATTTTTTCTAGTAAATTTCTACTTTAAAGGAAGGTTTCACATGGGTTTCACACGAGATAATATTT
CAAATTATGCCTTGAGATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI
IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE
VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE
IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG

Sequences:

>Translated_287_residues
MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI
IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE
VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE
IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG
>Mature_287_residues
MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI
IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE
VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE
IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33387; Mature: 33387

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDA
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHCCCCCEEEEEECC
DGIERYEVEIQLGATDESHIIRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFN
CCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHC
GSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEEVAEVTNRDYWLKRGTPKTVA
CCCHHHEEEEHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCHHHH
MADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE
HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHH
IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG
HHHHHHHCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDA
CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHCCCCCEEEEEECC
DGIERYEVEIQLGATDESHIIRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFN
CCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHC
GSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEEVAEVTNRDYWLKRGTPKTVA
CCCHHHEEEEHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCHHHH
MADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE
HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHH
IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG
HHHHHHHCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA