| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
Click here to switch to the map view.
The map label for this gene is 124024754
Identifier: 124024754
GI number: 124024754
Start: 42106
End: 42969
Strand: Direct
Name: 124024754
Synonym: NATL1_00411
Alternate gene names: NA
Gene position: 42106-42969 (Clockwise)
Preceding gene: 124024750
Following gene: 124024759
Centisome position: 2.26
GC content: 32.41
Gene sequence:
>864_bases ATGAAACATATTCCATTAAAAACCATTCAACTTAAGAACCATCAGGTCTTAAATGAAAGATGGTTACAGGACATAATTGC CGAGGATCCTTCCATAATTGGCATTGGAGATGTAATTCTCAAAGATAAAGAAAGAATTCATCAGGGTGCAGGAAGACTGG ATCTATTGCTTCAAGATGCAGATGGTATTGAAAGGTATGAAGTAGAAATTCAACTAGGAGCAACTGATGAATCTCATATT ATTAGAACTATTGAATATTGGGATATTGAAAGGAAAAGATACCCTCAGTACAACCACACTGCAATAATCATTGCTGAAGA TATTACGAGTCGTTTTTTAAATGTAATTAGTTTGTTTAATGGATCTATTCCATTAATGGCGATTCAAGTATGTGCTATTC AAACTGCAGAAGGGGTTGGACTCCATTTCACCAAAGTACTTGATGTACAACAATTAGGATTAGTTGATGAGGATGAGGAA GTCGCAGAAGTCACTAATAGAGATTATTGGTTGAAGCGTGGCACACCAAAAACAGTAGCAATGGCAGATAAACTTCTTTC TTATATTCATGAGTTTGACCATGATGCAGAATTGAACTACAACAAGTTTTATATAGGACTAAAAATTAATAGCAGATCTA AAAATTATGCAATCTTTCGACCTAAAAAGAATTTCATAGGTTTAGAAATTAAAATGCCACAAACTGAAGAGAATGATGAA ATAATAAATCAAGCAGAAATTGCTAATTTAGATTATTCCAAAAGATATGGATATTATCGACTAAGCATTTATGAAAGAGA TTTAGAAGAAAAATCAGACTTTATCAAGAAATTACTTCTTGATGCAAAAGAAAGATTTGGTTAA
Upstream 100 bases:
>100_bases TCATGTATTTTATTTCATGGGGATCTAAGTTTAATTTACTTTGACTTAGTAATTAATTTTTACTTTAAGTTCTACAATTA ATTAAAAGGTTTTTGAAAAA
Downstream 100 bases:
>100_bases AATTATTAAATGATAATTTTTTCTAGTAAATTTCTACTTTAAAGGAAGGTTTCACATGGGTTTCACACGAGATAATATTT CAAATTATGCCTTGAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG
Sequences:
>Translated_287_residues MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG >Mature_287_residues MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDADGIERYEVEIQLGATDESHI IRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFNGSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEE VAEVTNRDYWLKRGTPKTVAMADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33387; Mature: 33387
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDA CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHCCCCCEEEEEECC DGIERYEVEIQLGATDESHIIRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFN CCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHC GSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEEVAEVTNRDYWLKRGTPKTVA CCCHHHEEEEHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCHHHH MADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHH IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG HHHHHHHCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHIPLKTIQLKNHQVLNERWLQDIIAEDPSIIGIGDVILKDKERIHQGAGRLDLLLQDA CCCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHHCCCCCEEEEEECC DGIERYEVEIQLGATDESHIIRTIEYWDIERKRYPQYNHTAIIIAEDITSRFLNVISLFN CCCEEEEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHC GSIPLMAIQVCAIQTAEGVGLHFTKVLDVQQLGLVDEDEEVAEVTNRDYWLKRGTPKTVA CCCHHHEEEEHHHCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEECCCCHHHH MADKLLSYIHEFDHDAELNYNKFYIGLKINSRSKNYAIFRPKKNFIGLEIKMPQTEENDE HHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHH IINQAEIANLDYSKRYGYYRLSIYERDLEEKSDFIKKLLLDAKERFG HHHHHHHCCCCHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA