Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024759

Identifier: 124024759

GI number: 124024759

Start: 49619

End: 50356

Strand: Direct

Name: 124024759

Synonym: NATL1_00461

Alternate gene names: NA

Gene position: 49619-50356 (Clockwise)

Preceding gene: 124024754

Following gene: 124024760

Centisome position: 2.66

GC content: 37.13

Gene sequence:

>738_bases
TTGGATCAAATGTCATTTGAAGTTACTTACAATGGCGATATTCAATACATTAAAGTTTTCTACTCAACTGAAAAAACGAG
AGCTGGAAAATACTATGGCGAGTTTTATAAAAAAATGGATGCATTAGCGAGTGACTTAAAACGCCTTAAACAAGAACTTG
ATGAAGATTGTGAAAAGGCAGCCAAGATTGCTAAAGATGCTGCCAACAAGGCACTTTCTGAAAGATTTGGCTCACTTCGG
TACATTATTGATGAGCATCTATGGGATCAAGACATTGTTATCAGCAAGATTCTTGATGATAGAAAAGAAGAGATGTTGGC
TTTAGCACAGAAGACTTTTAATAATGAAGTTCTTCTTGAAGAGGATGGGGCAGAGGAATACAAAATCCACTTGGATGAAG
GTGGAATTGAAGTTGATGGTAAAAGTGTTGAGACATCGATAATGGAGTTTTTTGATTCTGACGACTACCACGAATCGAAT
GAGGCAAAACTAGAAAAATTGGAAAAACTTGATTGGTTTATCATCTGGTCGAGAACCGAGGCAGGAGAGTTTAGGACAGA
GGGTGGACAACACGAGGGTAATTATTCATCAAAGGAATTAAATATGGAAGATTGTTTGCTTACCTATAGAGATTTACCCC
TTGTTATTCCCTCTAATGGCACGGACATCTTCAGTAATGAACTTGAAATTCATTTTGTAGATGAAACTAGGGCATCCCTT
GAGATGAGTGAATCTTAA

Upstream 100 bases:

>100_bases
GCTCTCGCTTATGGCTTGCTTGGTTGAACTTTTTTTTCTAATCAAGAATTAATTATGGCGAGGCTTCGAAAAAGACGTGA
TCATTTAAATAAGGGATAGT

Downstream 100 bases:

>100_bases
AAGCATTCTCATGAATTTGATTATCAACTAATTTCCAACTATTGCAATTCAGTTCTCTTTGAGTTCTGTAGCATTCACTA
AATCGATTTGTCTTGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDQMSFEVTYNGDIQYIKVFYSTEKTRAGKYYGEFYKKMDALASDLKRLKQELDEDCEKAAKIAKDAANKALSERFGSLR
YIIDEHLWDQDIVISKILDDRKEEMLALAQKTFNNEVLLEEDGAEEYKIHLDEGGIEVDGKSVETSIMEFFDSDDYHESN
EAKLEKLEKLDWFIIWSRTEAGEFRTEGGQHEGNYSSKELNMEDCLLTYRDLPLVIPSNGTDIFSNELEIHFVDETRASL
EMSES

Sequences:

>Translated_245_residues
MDQMSFEVTYNGDIQYIKVFYSTEKTRAGKYYGEFYKKMDALASDLKRLKQELDEDCEKAAKIAKDAANKALSERFGSLR
YIIDEHLWDQDIVISKILDDRKEEMLALAQKTFNNEVLLEEDGAEEYKIHLDEGGIEVDGKSVETSIMEFFDSDDYHESN
EAKLEKLEKLDWFIIWSRTEAGEFRTEGGQHEGNYSSKELNMEDCLLTYRDLPLVIPSNGTDIFSNELEIHFVDETRASL
EMSES
>Mature_245_residues
MDQMSFEVTYNGDIQYIKVFYSTEKTRAGKYYGEFYKKMDALASDLKRLKQELDEDCEKAAKIAKDAANKALSERFGSLR
YIIDEHLWDQDIVISKILDDRKEEMLALAQKTFNNEVLLEEDGAEEYKIHLDEGGIEVDGKSVETSIMEFFDSDDYHESN
EAKLEKLEKLDWFIIWSRTEAGEFRTEGGQHEGNYSSKELNMEDCLLTYRDLPLVIPSNGTDIFSNELEIHFVDETRASL
EMSES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28390; Mature: 28390

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQMSFEVTYNGDIQYIKVFYSTEKTRAGKYYGEFYKKMDALASDLKRLKQELDEDCEKA
CCCEEEEEEECCCEEEEEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIAKDAANKALSERFGSLRYIIDEHLWDQDIVISKILDDRKEEMLALAQKTFNNEVLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EDGAEEYKIHLDEGGIEVDGKSVETSIMEFFDSDDYHESNEAKLEKLEKLDWFIIWSRTE
CCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCC
AGEFRTEGGQHEGNYSSKELNMEDCLLTYRDLPLVIPSNGTDIFSNELEIHFVDETRASL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECCCEEEEEECCCCCCE
EMSES
ECCCC
>Mature Secondary Structure
MDQMSFEVTYNGDIQYIKVFYSTEKTRAGKYYGEFYKKMDALASDLKRLKQELDEDCEKA
CCCEEEEEEECCCEEEEEEEEECCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKIAKDAANKALSERFGSLRYIIDEHLWDQDIVISKILDDRKEEMLALAQKTFNNEVLLE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
EDGAEEYKIHLDEGGIEVDGKSVETSIMEFFDSDDYHESNEAKLEKLEKLDWFIIWSRTE
CCCCCEEEEEEECCCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEEEECCC
AGEFRTEGGQHEGNYSSKELNMEDCLLTYRDLPLVIPSNGTDIFSNELEIHFVDETRASL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCEEECCCEEEEEECCCCCCE
EMSES
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA