| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124024714
Identifier: 124024714
GI number: 124024714
Start: 1351
End: 2121
Strand: Direct
Name: 124024714
Synonym: NATL1_00011
Alternate gene names: NA
Gene position: 1351-2121 (Clockwise)
Preceding gene: 124024713
Following gene: 124024715
Centisome position: 0.07
GC content: 32.17
Gene sequence:
>771_bases TTGGCTGTCCCTAAAAAATTACTACTTAGTGATTTACTAAAACATAATGTTCGTTGTGATAGTGGAATGGATCACGGTCC AGTTATTACTCCATGGATGCATCCACCTGTCCATAGGATATTAGGATTTATAACTCGTCCCTCTAACTTGAGACTTGAAA GAGAAGTATGGAGATTAGATCAACTAAAAGGAATAAATCAACAAGAAGTTTACGTAAAAGGTCCCTGTTCAGTTTCTGAT CAACAAACTTTAGATCGTTTTCCTACTTTATTGAATGCAAATGTTTTTAATAAAAGTGGACAAAAAATAGGTTTAATAGC TGATTTTCTTTTTGAGCCAAAGAAAGGAAATATACAATATTATTTAGTTAGTAGATCGAATCCATTTATTCCAGGAACTA GTAGGTGGCTTTTATCTATAGCTCAAATTATTGATAAACAGCCAGGTTCTATCTCTTGCGATATTGAAACATTTGAAGAT CTACCAATACAGAAAGCTAGTTTAAAAGAAGAATTTCTTAGTAAGAGCAGAAAATGGACAGCTCAATTTCAAGATTTAAC TTACAGTGCTTCCGATAAGCTTGAGGGGTGGATTGATGAGCAAATTAGTGAAAGTGATAACGATTCTTATGAAAGTCTGA ATGACGATTCTTCATATGATGATTGGATAGACAATTTAGATATAGATAGTTCTGAAGAATTTAATAGAATGAATGAATCT AAGAAAAATACAAATTCCAGTAATGAAAGAGATCTTGATCCTTGGATTTAA
Upstream 100 bases:
>100_bases TAAGTTGTAATTCTCCAACTACACCTGCGGTTTTCTCACCTATTAATAGTGACGTTAATTTCACTTATCTAGTAATGCCC ATACAAATACGAAATTAATT
Downstream 100 bases:
>100_bases TAATGACAGTATCCTTTGAAAATAAAGATTTCAACCAATTCATTAATTCATCAAAATTTCTTGTTGAATATGATGTTATG TCCGCTCTTAAGCAAGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAVPKKLLLSDLLKHNVRCDSGMDHGPVITPWMHPPVHRILGFITRPSNLRLEREVWRLDQLKGINQQEVYVKGPCSVSD QQTLDRFPTLLNANVFNKSGQKIGLIADFLFEPKKGNIQYYLVSRSNPFIPGTSRWLLSIAQIIDKQPGSISCDIETFED LPIQKASLKEEFLSKSRKWTAQFQDLTYSASDKLEGWIDEQISESDNDSYESLNDDSSYDDWIDNLDIDSSEEFNRMNES KKNTNSSNERDLDPWI
Sequences:
>Translated_256_residues MAVPKKLLLSDLLKHNVRCDSGMDHGPVITPWMHPPVHRILGFITRPSNLRLEREVWRLDQLKGINQQEVYVKGPCSVSD QQTLDRFPTLLNANVFNKSGQKIGLIADFLFEPKKGNIQYYLVSRSNPFIPGTSRWLLSIAQIIDKQPGSISCDIETFED LPIQKASLKEEFLSKSRKWTAQFQDLTYSASDKLEGWIDEQISESDNDSYESLNDDSSYDDWIDNLDIDSSEEFNRMNES KKNTNSSNERDLDPWI >Mature_255_residues AVPKKLLLSDLLKHNVRCDSGMDHGPVITPWMHPPVHRILGFITRPSNLRLEREVWRLDQLKGINQQEVYVKGPCSVSDQ QTLDRFPTLLNANVFNKSGQKIGLIADFLFEPKKGNIQYYLVSRSNPFIPGTSRWLLSIAQIIDKQPGSISCDIETFEDL PIQKASLKEEFLSKSRKWTAQFQDLTYSASDKLEGWIDEQISESDNDSYESLNDDSSYDDWIDNLDIDSSEEFNRMNESK KNTNSSNERDLDPWI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29444; Mature: 29313
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPKKLLLSDLLKHNVRCDSGMDHGPVITPWMHPPVHRILGFITRPSNLRLEREVWRLD CCCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QLKGINQQEVYVKGPCSVSDQQTLDRFPTLLNANVFNKSGQKIGLIADFLFEPKKGNIQY HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHCCCCCCCEEE YLVSRSNPFIPGTSRWLLSIAQIIDKQPGSISCDIETFEDLPIQKASLKEEFLSKSRKWT EEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHH AQFQDLTYSASDKLEGWIDEQISESDNDSYESLNDDSSYDDWIDNLDIDSSEEFNRMNES HHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHH KKNTNSSNERDLDPWI HCCCCCCCCCCCCCCC >Mature Secondary Structure AVPKKLLLSDLLKHNVRCDSGMDHGPVITPWMHPPVHRILGFITRPSNLRLEREVWRLD CCCHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH QLKGINQQEVYVKGPCSVSDQQTLDRFPTLLNANVFNKSGQKIGLIADFLFEPKKGNIQY HHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHCCCCCCCEEE YLVSRSNPFIPGTSRWLLSIAQIIDKQPGSISCDIETFEDLPIQKASLKEEFLSKSRKWT EEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCCHHHHHHHHHHHHHHHH AQFQDLTYSASDKLEGWIDEQISESDNDSYESLNDDSSYDDWIDNLDIDSSEEFNRMNES HHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHH KKNTNSSNERDLDPWI HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA