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The map label for this gene is nudF [H]

Identifier: 124028273

GI number: 124028273

Start: 1428330

End: 1428794

Strand: Reverse

Name: nudF [H]

Synonym: Hbut_1424

Alternate gene names: 124028273

Gene position: 1428794-1428330 (Counterclockwise)

Preceding gene: 124028274

Following gene: 124028272

Centisome position: 85.7

GC content: 58.06

Gene sequence:

>465_bases
GTGACTCCTATCGTTGGGCTTGTGCTTGGTGTTGGCGCTATAGTTGTACGCCGCGGTAGCGCTGGACTAGAGGTTCTCCT
GGTTAGGCGTAAGTATGACCCGTTTCGGGGCTATTGGAGCTTTCCCGGCGGCCATGTTGAGCCTGGTGAGCCATTGCTAG
AGGCTGCTGCTCGTGAACTCCTTGAGGAGACGGGTATCCGGGCTAGGCCTCTGGGCGTGATACACATCCACGAGCTGGTA
GCCGAGGGGCCTGATGGGAGACGGCACCACTACGTGATAATAGACGTTGTCTTCGAGTATGAGGGTGGAGAGCCCAGGGC
CTCCAGTGATGCCGAGGATGCTGCGTTTGTCCCACTGGTGGAGGCGCTAAAGCTAAGGTTGACACCTGGAGCTAGGCTAG
TACTGCAGAAGCTGCCAGAGATGCTCCAACGGGGCTGCACTATAGAGCCGACACGCACAGAGTAG

Upstream 100 bases:

>100_bases
TGCTCCCGGGCTGCCCCGCCGTGTTCTTATTATAGCGGGGGATTCTTCGGGTTTGGTAGAAGGTTTCTACCCATCATGCC
GGGTGGGGGGTTAGGGGTTC

Downstream 100 bases:

>100_bases
GGGAGAGGCCGTTGCATAGCAGCCAATAGGGCCGCCTCTTTCCGGGCTTGGGTCTATATAGGTGGGCCTATAATCTCCCT
ATTCTGCTGGTGTGGTGGCT

Product: ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MTPIVGLVLGVGAIVVRRGSAGLEVLLVRRKYDPFRGYWSFPGGHVEPGEPLLEAAARELLEETGIRARPLGVIHIHELV
AEGPDGRRHHYVIIDVVFEYEGGEPRASSDAEDAAFVPLVEALKLRLTPGARLVLQKLPEMLQRGCTIEPTRTE

Sequences:

>Translated_154_residues
MTPIVGLVLGVGAIVVRRGSAGLEVLLVRRKYDPFRGYWSFPGGHVEPGEPLLEAAARELLEETGIRARPLGVIHIHELV
AEGPDGRRHHYVIIDVVFEYEGGEPRASSDAEDAAFVPLVEALKLRLTPGARLVLQKLPEMLQRGCTIEPTRTE
>Mature_153_residues
TPIVGLVLGVGAIVVRRGSAGLEVLLVRRKYDPFRGYWSFPGGHVEPGEPLLEAAARELLEETGIRARPLGVIHIHELVA
EGPDGRRHHYVIIDVVFEYEGGEPRASSDAEDAAFVPLVEALKLRLTPGARLVLQKLPEMLQRGCTIEPTRTE

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 16907; Mature: 16776

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIVGLVLGVGAIVVRRGSAGLEVLLVRRKYDPFRGYWSFPGGHVEPGEPLLEAAAREL
CCHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHH
LEETGIRARPLGVIHIHELVAEGPDGRRHHYVIIDVVFEYEGGEPRASSDAEDAAFVPLV
HHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHH
EALKLRLTPGARLVLQKLPEMLQRGCTIEPTRTE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TPIVGLVLGVGAIVVRRGSAGLEVLLVRRKYDPFRGYWSFPGGHVEPGEPLLEAAAREL
CHHHHHHHHHHHHEEECCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCHHHHHHHHHH
LEETGIRARPLGVIHIHELVAEGPDGRRHHYVIIDVVFEYEGGEPRASSDAEDAAFVPLV
HHHCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCHHHHHHH
EALKLRLTPGARLVLQKLPEMLQRGCTIEPTRTE
HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]