Click here to switch to the map view.

The map label for this gene is yufQ [H]

Identifier: 124028264

GI number: 124028264

Start: 1417180

End: 1418067

Strand: Reverse

Name: yufQ [H]

Synonym: Hbut_1415

Alternate gene names: 124028264

Gene position: 1418067-1417180 (Counterclockwise)

Preceding gene: 124028265

Following gene: 124028256

Centisome position: 85.06

GC content: 56.87

Gene sequence:

>888_bases
GTGGAGACTCTTACACTCTTCATCCTAGGCGTCCTAAATGCTATGACGCCAATACTCCTCACGGCTCTAGGCGAGATACT
CGCTGAACGCGCTGGAGTAGTAAACATAGGACTCGAAGGCATAATAATGATTGGAGCCCTGGTAGCCGTAATGGCTGGCG
AAGCAGCGCACAGCCCGTGGATCGGCCTAGCGGCAGGCACAGGCGTCGGCGCGGCGATAGGCCTTCTACACGCTATCCTC
ACAGCATACCTCAAGGGCGACCACATAATCCCGGGGGTGGGCATCAACACTCTAGCCCTCGGCCTGGTACCCTTCACGCT
GATAGTCTACTGGCACAGCGCTGGCCACTATCAAGTGCCAAGCTATGCAAGGGTACCCCACATGGCTGGCCTCAGCCCGA
TAACACTTTTCGCGATAGTATTGTCCCCGCTGCTCTGGTACCTACTATTCAAGACCCCAACCGGGCTGAAGATACGCAGC
GTGGGCGAAAACCCGGAAGCAGCGGACACGGTGGGTGTCAGGGTTGAGAGAACGCAGGCTCTAGCAGTAATAGCTGGCGC
CTCTCTAGCAGGACTTGCAGGCGCCTACATGAGCCTCGACTGGCTCTCAACAGTGACGAAGGAGATAGCGGCTGGTAGGG
GCTTCATAGCCCTGGCACTAGTAGTGTTTAGCAACTGGAACCCCCTACGCGCCCTCGGTGGAGCGGCTCTCTTCGGGTTC
TTCGACACTCTCCGTGAGTGGGTCAAAACGATGCCTGCCGTGAAGGCTGTTGTCCCCGATACGCTGCTAAACACGATACC
ATACATAGTCACGCTGGCAGCAGTAGCAGGAGTGCTAGGGAAGGTCAAGCCACCAAGACATGTAGGCATACCCTACAAGA
GGGAGTAA

Upstream 100 bases:

>100_bases
TAATCATAGCCCTTGCAATACCCGGGGTGTTCCATATGCTCTCGGAGTACCTGCGCCGTAGGAAGGAGCTGAGAGAGCTA
CAGGCCAGGGGTGAGTAACC

Downstream 100 bases:

>100_bases
CCCATCTCCACACTTAGACATTGATTTCCTTGCCGAACGTCTTTTCATATAGTTGGGATTCCGTCCGGGCCGCTCCGGGC
ATGGATTCTATGCTCCTTCC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
METLTLFILGVLNAMTPILLTALGEILAERAGVVNIGLEGIIMIGALVAVMAGEAAHSPWIGLAAGTGVGAAIGLLHAIL
TAYLKGDHIIPGVGINTLALGLVPFTLIVYWHSAGHYQVPSYARVPHMAGLSPITLFAIVLSPLLWYLLFKTPTGLKIRS
VGENPEAADTVGVRVERTQALAVIAGASLAGLAGAYMSLDWLSTVTKEIAAGRGFIALALVVFSNWNPLRALGGAALFGF
FDTLREWVKTMPAVKAVVPDTLLNTIPYIVTLAAVAGVLGKVKPPRHVGIPYKRE

Sequences:

>Translated_295_residues
METLTLFILGVLNAMTPILLTALGEILAERAGVVNIGLEGIIMIGALVAVMAGEAAHSPWIGLAAGTGVGAAIGLLHAIL
TAYLKGDHIIPGVGINTLALGLVPFTLIVYWHSAGHYQVPSYARVPHMAGLSPITLFAIVLSPLLWYLLFKTPTGLKIRS
VGENPEAADTVGVRVERTQALAVIAGASLAGLAGAYMSLDWLSTVTKEIAAGRGFIALALVVFSNWNPLRALGGAALFGF
FDTLREWVKTMPAVKAVVPDTLLNTIPYIVTLAAVAGVLGKVKPPRHVGIPYKRE
>Mature_295_residues
METLTLFILGVLNAMTPILLTALGEILAERAGVVNIGLEGIIMIGALVAVMAGEAAHSPWIGLAAGTGVGAAIGLLHAIL
TAYLKGDHIIPGVGINTLALGLVPFTLIVYWHSAGHYQVPSYARVPHMAGLSPITLFAIVLSPLLWYLLFKTPTGLKIRS
VGENPEAADTVGVRVERTQALAVIAGASLAGLAGAYMSLDWLSTVTKEIAAGRGFIALALVVFSNWNPLRALGGAALFGF
FDTLREWVKTMPAVKAVVPDTLLNTIPYIVTLAAVAGVLGKVKPPRHVGIPYKRE

Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG1079

COG function: function code R; Uncharacterized ABC-type transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 30924; Mature: 30924

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLTLFILGVLNAMTPILLTALGEILAERAGVVNIGLEGIIMIGALVAVMAGEAAHSPW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCCCCCC
IGLAAGTGVGAAIGLLHAILTAYLKGDHIIPGVGINTLALGLVPFTLIVYWHSAGHYQVP
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
SYARVPHMAGLSPITLFAIVLSPLLWYLLFKTPTGLKIRSVGENPEAADTVGVRVERTQA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCEEEHHHH
LAVIAGASLAGLAGAYMSLDWLSTVTKEIAAGRGFIALALVVFSNWNPLRALGGAALFGF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
FDTLREWVKTMPAVKAVVPDTLLNTIPYIVTLAAVAGVLGKVKPPRHVGIPYKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
METLTLFILGVLNAMTPILLTALGEILAERAGVVNIGLEGIIMIGALVAVMAGEAAHSPW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHCCCCCCCC
IGLAAGTGVGAAIGLLHAILTAYLKGDHIIPGVGINTLALGLVPFTLIVYWHSAGHYQVP
EEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
SYARVPHMAGLSPITLFAIVLSPLLWYLLFKTPTGLKIRSVGENPEAADTVGVRVERTQA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCEEEHHHH
LAVIAGASLAGLAGAYMSLDWLSTVTKEIAAGRGFIALALVVFSNWNPLRALGGAALFGF
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
FDTLREWVKTMPAVKAVVPDTLLNTIPYIVTLAAVAGVLGKVKPPRHVGIPYKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]