Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 124028265

GI number: 124028265

Start: 1418070

End: 1419167

Strand: Reverse

Name: yufP [H]

Synonym: Hbut_1416

Alternate gene names: 124028265

Gene position: 1419167-1418070 (Counterclockwise)

Preceding gene: 124028266

Following gene: 124028264

Centisome position: 85.12

GC content: 54.83

Gene sequence:

>1098_bases
ATGCCGGAGTGGCTGCGGCGTGGCCTGCTAAGGTTTGGCGAGAGCGTGCTATCGCTAGTAATAGGCTTGCTTGTTGGAGC
TATAGTGGTGTATGTGAGTGGCTACGACCCGGTGGAGGCGTATCGCAGCCTCTTCGAGATGAGCTTCCTTGACATCTATG
GTTTGAGTACGAGCCTCAGCGCTGCAGCTCCAATAATGCTTACCGGCATAACCTTCGCGGTCGGCGTTCGGGCAGGCCTC
TTCAACATTGGCGCAGAAGGCCAGCTCTACATAGGCGCCCTTGGCGCAGTCCTCGTAGCCTGGATAGCCCGTAACTGGGT
TCCAGCACTCGACTCGCCCCTCGGCACAGTTGCCGCGTACGCTCTGGGCGTCATTCTAGCTGTCGGCCTAGCATTGATTG
CAGCATTACTCAAGGTTAAGAGGGGTGTACACGAGGTAGTATCAACAATCATGCTTAACTGGATAGCATTCTGGGTTGTA
GAGTACTTTAGGGTGTACATTGTCTACAACCCAGAGGATCCATCAAAGACTGTTAGCGTACCCGAGCAGGCGAGGCTACC
CCTACTCATGGCGCACTCCGAACTCTCACTAGCAATAATAGTATCCATCGCCTTTACGCTGCTGACCTACTTCCTCCTAT
GGCACACCGTTGAAGGCTATGAGCTGCGTGCAGCAGGCCTCAACCCGCTAGCAGCAAGGTATGCTGGCATAAAGCCTGAG
AAAGCAGTAATACTCTCCTTCCTCATAGGCGGCATCGCCGCCGGGCTTGCTGGTGCCGGCGAGGTGCTAGGAAAACCGCC
GAACTACTCGATAACGACAGGGCTCAGCAACCTCTACGGGCTAGGATTCGACGGCATCACCGTAGCATTGATAGGAGCAA
ACCACCCCATAGGCATAATATTCGCAGCATTCTTTGTTGGCGGGCTTAAGGCTGGCGCTAGGTACATGCAGATATTCGCT
GGCATCCCACTCGAGATGGTTAGAATCGTGGAGGGCGTGATAATCATAGCCCTTGCAATACCCGGGGTGTTCCATATGCT
CTCGGAGTACCTGCGCCGTAGGAAGGAGCTGAGAGAGCTACAGGCCAGGGGTGAGTAA

Upstream 100 bases:

>100_bases
CTTACCGAGGAGAAGCTTGGCCTTCTAATGGGCGGTATGGAGGTGGTGAAGGCTGGCCAGTGACAAGCTGGCTAGCCTCG
CCCGGTTCAAGCCTAGCTCC

Downstream 100 bases:

>100_bases
CCGTGGAGACTCTTACACTCTTCATCCTAGGCGTCCTAAATGCTATGACGCCAATACTCCTCACGGCTCTAGGCGAGATA
CTCGCTGAACGCGCTGGAGT

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MPEWLRRGLLRFGESVLSLVIGLLVGAIVVYVSGYDPVEAYRSLFEMSFLDIYGLSTSLSAAAPIMLTGITFAVGVRAGL
FNIGAEGQLYIGALGAVLVAWIARNWVPALDSPLGTVAAYALGVILAVGLALIAALLKVKRGVHEVVSTIMLNWIAFWVV
EYFRVYIVYNPEDPSKTVSVPEQARLPLLMAHSELSLAIIVSIAFTLLTYFLLWHTVEGYELRAAGLNPLAARYAGIKPE
KAVILSFLIGGIAAGLAGAGEVLGKPPNYSITTGLSNLYGLGFDGITVALIGANHPIGIIFAAFFVGGLKAGARYMQIFA
GIPLEMVRIVEGVIIIALAIPGVFHMLSEYLRRRKELRELQARGE

Sequences:

>Translated_365_residues
MPEWLRRGLLRFGESVLSLVIGLLVGAIVVYVSGYDPVEAYRSLFEMSFLDIYGLSTSLSAAAPIMLTGITFAVGVRAGL
FNIGAEGQLYIGALGAVLVAWIARNWVPALDSPLGTVAAYALGVILAVGLALIAALLKVKRGVHEVVSTIMLNWIAFWVV
EYFRVYIVYNPEDPSKTVSVPEQARLPLLMAHSELSLAIIVSIAFTLLTYFLLWHTVEGYELRAAGLNPLAARYAGIKPE
KAVILSFLIGGIAAGLAGAGEVLGKPPNYSITTGLSNLYGLGFDGITVALIGANHPIGIIFAAFFVGGLKAGARYMQIFA
GIPLEMVRIVEGVIIIALAIPGVFHMLSEYLRRRKELRELQARGE
>Mature_364_residues
PEWLRRGLLRFGESVLSLVIGLLVGAIVVYVSGYDPVEAYRSLFEMSFLDIYGLSTSLSAAAPIMLTGITFAVGVRAGLF
NIGAEGQLYIGALGAVLVAWIARNWVPALDSPLGTVAAYALGVILAVGLALIAALLKVKRGVHEVVSTIMLNWIAFWVVE
YFRVYIVYNPEDPSKTVSVPEQARLPLLMAHSELSLAIIVSIAFTLLTYFLLWHTVEGYELRAAGLNPLAARYAGIKPEK
AVILSFLIGGIAAGLAGAGEVLGKPPNYSITTGLSNLYGLGFDGITVALIGANHPIGIIFAAFFVGGLKAGARYMQIFAG
IPLEMVRIVEGVIIIALAIPGVFHMLSEYLRRRKELRELQARGE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 39190; Mature: 39059

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEWLRRGLLRFGESVLSLVIGLLVGAIVVYVSGYDPVEAYRSLFEMSFLDIYGLSTSLS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
AAAPIMLTGITFAVGVRAGLFNIGAEGQLYIGALGAVLVAWIARNWVPALDSPLGTVAAY
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ALGVILAVGLALIAALLKVKRGVHEVVSTIMLNWIAFWVVEYFRVYIVYNPEDPSKTVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
PEQARLPLLMAHSELSLAIIVSIAFTLLTYFLLWHTVEGYELRAAGLNPLAARYAGIKPE
CHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCH
KAVILSFLIGGIAAGLAGAGEVLGKPPNYSITTGLSNLYGLGFDGITVALIGANHPIGII
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEECCCCHHHH
FAAFFVGGLKAGARYMQIFAGIPLEMVRIVEGVIIIALAIPGVFHMLSEYLRRRKELREL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGE
HHCCC
>Mature Secondary Structure 
PEWLRRGLLRFGESVLSLVIGLLVGAIVVYVSGYDPVEAYRSLFEMSFLDIYGLSTSLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
AAAPIMLTGITFAVGVRAGLFNIGAEGQLYIGALGAVLVAWIARNWVPALDSPLGTVAAY
HHCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
ALGVILAVGLALIAALLKVKRGVHEVVSTIMLNWIAFWVVEYFRVYIVYNPEDPSKTVSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC
PEQARLPLLMAHSELSLAIIVSIAFTLLTYFLLWHTVEGYELRAAGLNPLAARYAGIKPE
CHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCH
KAVILSFLIGGIAAGLAGAGEVLGKPPNYSITTGLSNLYGLGFDGITVALIGANHPIGII
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCEEECCHHHHHCCCCCCEEEEEEECCCCHHHH
FAAFFVGGLKAGARYMQIFAGIPLEMVRIVEGVIIIALAIPGVFHMLSEYLRRRKELREL
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]