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The map label for this gene is ef1B

Identifier: 124028209

GI number: 124028209

Start: 1346994

End: 1347272

Strand: Direct

Name: ef1B

Synonym: Hbut_1357

Alternate gene names: 124028209

Gene position: 1346994-1347272 (Clockwise)

Preceding gene: 124028200

Following gene: 124028210

Centisome position: 80.8

GC content: 52.33

Gene sequence:

>279_bases
ATGGCGAGAGTACTGGTCGTAACAACAGTCTACCCCTCAAGCCCAGAGATAAACCTGGACGAGCTTGTCGAGAAGATAAA
GTCAAAGCTGCCAAGCGACTACGAGATAACTAGGTACGACAAGGTACCAATAGCCTTCGGCCTCAACGCCCTCAAGCTCT
ACGTGATAATCCCGGAGGAGAGCGAGGGCGGCACATCAAAGCTCGAGGAGATACTACAGAGCGTTGAGGGCGTCGAGGAG
ATAGAGGTAGAGGCCGTCCACAGGATATCAGAATACTAG

Upstream 100 bases:

>100_bases
GCACAGCCATGCAAGAGGCTGGACCAGCAGAAACCATAGGGCTTGGAGGGAGACACAATATAATCCTCTCCAGGGTCTCG
GGCTAGGCACGGCGAGGCCT

Downstream 100 bases:

>100_bases
CTGTACAGTCCGGAGTATGCTCAAGTCAAATGGATGTTTTTACAGCTCGACACCATATCGTAGGGCTTGAACGCTATTCG
CACAGCTATATAGGGGGCCC

Product: elongation factor 1-beta

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MARVLVVTTVYPSSPEINLDELVEKIKSKLPSDYEITRYDKVPIAFGLNALKLYVIIPEESEGGTSKLEEILQSVEGVEE
IEVEAVHRISEY

Sequences:

>Translated_92_residues
MARVLVVTTVYPSSPEINLDELVEKIKSKLPSDYEITRYDKVPIAFGLNALKLYVIIPEESEGGTSKLEEILQSVEGVEE
IEVEAVHRISEY
>Mature_91_residues
ARVLVVTTVYPSSPEINLDELVEKIKSKLPSDYEITRYDKVPIAFGLNALKLYVIIPEESEGGTSKLEEILQSVEGVEEI
EVEAVHRISEY

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_HYPBU (A2BMH3)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013529.1
- ProteinModelPortal:   A2BMH3
- SMR:   A2BMH3
- STRING:   A2BMH3
- GeneID:   4781829
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_1357
- eggNOG:   arNOG12647
- HOGENOM:   HBG541037
- OMA:   VALKFYV
- ProtClustDB:   PRK00435
- BioCyc:   HBUT415426:HBUT_1357-MONOMER
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- PIRSF:   PIRSF006521
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 10352; Mature: 10221

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVLVVTTVYPSSPEINLDELVEKIKSKLPSDYEITRYDKVPIAFGLNALKLYVIIPEE
CCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCCEEEEEEEEECC
SEGGTSKLEEILQSVEGVEEIEVEAVHRISEY
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARVLVVTTVYPSSPEINLDELVEKIKSKLPSDYEITRYDKVPIAFGLNALKLYVIIPEE
CEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEECCCEEEEEEEEECC
SEGGTSKLEEILQSVEGVEEIEVEAVHRISEY
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA