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The map label for this gene is 124028001

Identifier: 124028001

GI number: 124028001

Start: 1150790

End: 1151392

Strand: Reverse

Name: 124028001

Synonym: Hbut_1139

Alternate gene names: NA

Gene position: 1151392-1150790 (Counterclockwise)

Preceding gene: 124028003

Following gene: 124028000

Centisome position: 69.06

GC content: 56.22

Gene sequence:

>603_bases
TTGACAGCACAGAGGAGGACTACACCACTCTACTGTGAGATGTGCGGCGCCCCGATAACGGGTAGGGCTTACCGTATAGT
CGTTGAAGGCACTGAAATGATGGTATGTGAACGTTGCTACAGCCGCTACATGGAGCGCTCAATGCGTACGGGGACAGATG
AGCCTCTACGCTATCGCCTCACTACAACCCGACGAACAACACAGCCAGCCCCTAGAGAGCCGGCGGCATCAGCAGTGCCG
GCTCTGCGGAGGCAACAAGCGAGGAGGCCAGCGGCTCTCAGGAAGAGAGAGACAAGCCTAGGTGTTGTTGAACGCTACGA
AGTGGTTGAGGACTATGCTGAGAGAATTAGGAGGGCTAGGCAGCGCCTCGGCCTAACCCAGCGCGAGCTAGCCCAGAAGG
TGAGGGTCGGCGAGAACGTTATCAAGAGGATTGAAGCTGGCACACTAGTACCGCCAATAGATCTTGCTAGGAGGCTAGAG
AGGGTTCTCGGCGTAAAACTGTTGGAACCAGTGGTCGAGGAAGAGCTGGAGGCAAGCCCCCGCTCTAGGAGGGACGAGTT
CTACCTAACGTTAGGCGATATAGCCGAAATAAGGGAGGACTAG

Upstream 100 bases:

>100_bases
TGTACTGCATACTCTAGCGCCACCATGCACCTATATTAGAGATAGGATGAAGCCTAAATAATGGTTTGCGGCTCGTAACT
ACACTGGTGATACTAGCCCC

Downstream 100 bases:

>100_bases
GCTCCAAGATGTTGTGGAGGTTAGCTTGCCAGGGTGGGTATTGAGGCATGGCTAAGGTTGCTGTTTGGAAACCATCAATA
CTAGTGCTGCCCCGTGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTAQRRTTPLYCEMCGAPITGRAYRIVVEGTEMMVCERCYSRYMERSMRTGTDEPLRYRLTTTRRTTQPAPREPAASAVP
ALRRQQARRPAALRKRETSLGVVERYEVVEDYAERIRRARQRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLE
RVLGVKLLEPVVEEELEASPRSRRDEFYLTLGDIAEIRED

Sequences:

>Translated_200_residues
MTAQRRTTPLYCEMCGAPITGRAYRIVVEGTEMMVCERCYSRYMERSMRTGTDEPLRYRLTTTRRTTQPAPREPAASAVP
ALRRQQARRPAALRKRETSLGVVERYEVVEDYAERIRRARQRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLE
RVLGVKLLEPVVEEELEASPRSRRDEFYLTLGDIAEIRED
>Mature_199_residues
TAQRRTTPLYCEMCGAPITGRAYRIVVEGTEMMVCERCYSRYMERSMRTGTDEPLRYRLTTTRRTTQPAPREPAASAVPA
LRRQQARRPAALRKRETSLGVVERYEVVEDYAERIRRARQRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLER
VLGVKLLEPVVEEELEASPRSRRDEFYLTLGDIAEIRED

Specific function: Unknown

COG id: COG1813

COG function: function code K; Predicted transcription factor, homolog of eukaryotic MBF1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004451
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 23134; Mature: 23003

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQRRTTPLYCEMCGAPITGRAYRIVVEGTEMMVCERCYSRYMERSMRTGTDEPLRYRL
CCCCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TTTRRTTQPAPREPAASAVPALRRQQARRPAALRKRETSLGVVERYEVVEDYAERIRRAR
ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLERVLGVKLLEPVVEEELEASP
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSRRDEFYLTLGDIAEIRED
CCCCCCEEEEHHHHHHHCCC
>Mature Secondary Structure 
TAQRRTTPLYCEMCGAPITGRAYRIVVEGTEMMVCERCYSRYMERSMRTGTDEPLRYRL
CCCCCCCCHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
TTTRRTTQPAPREPAASAVPALRRQQARRPAALRKRETSLGVVERYEVVEDYAERIRRAR
ECCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRLGLTQRELAQKVRVGENVIKRIEAGTLVPPIDLARRLERVLGVKLLEPVVEEELEASP
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSRRDEFYLTLGDIAEIRED
CCCCCCEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]