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The map label for this gene is yjfR [C]

Identifier: 124027760

GI number: 124027760

Start: 886940

End: 887629

Strand: Direct

Name: yjfR [C]

Synonym: Hbut_0886

Alternate gene names: 124027760

Gene position: 886940-887629 (Clockwise)

Preceding gene: 124027756

Following gene: 124027761

Centisome position: 53.2

GC content: 52.46

Gene sequence:

>690_bases
ATGGGGTACGTTAGGTGGCTTGGCCACGCAGCCTTTGAGATAAGCATCGACGGCTACACTGTCCTCATCGACCCCTGGCT
TACAAATCCATTATCGCCGGTAAAGGTTGAGGACTACCGCGACAAGGTAGACCTCATCATAGTAACCCACGACCATGGTG
ACCATCTTGGCGAGAGCGTTGAACTGCTAAGGATTAACCGGCGTGCAAGGTTTGTAGCCGTATATGAGCTTGCAAACTAT
GTTGCTGAACAGCTTGGCGGTGCAACTGATAGAGTTATAGGGGCTAATATCGGTGGCCCAGTCCGCATCCCCGACATAAA
CCTTAAGGTCATGTTCTTCCCGGCAACGCACAGCTCTAGCCGTGGAACACCCACGGGTGTACTGATAGTAGGCAAGGAGA
CGAGCATATACCACGCAGGCGATACCGGCCTTGCAGCAGAGATGGCGCTTGTGGGCGAACTCTACAGCCCCAAAATAGCA
CTAGTGCCGATAGGTGGCCACTTCACGATGGATGCCTATCAGGCTGCTAAGGCTATAGAAATGCTTAGAGCCAAGGTGGT
AATCCCGATGCACTACAACACGTTCCCAGTAATCAGGGCCGACCCAGAAGAGCTAAAGAGGTATGTGGATGAGTTCAAGC
TGGATGCCAAGGTTGTAGTGCTCAAGCCTGGCGAGCTATACCAGTTCTAG

Upstream 100 bases:

>100_bases
TACTAACATCATAGTATATGACATGTGGCCTCGGGGGTAGGGGCTAAGAGTTTTGGAGCTACTCGGTGTAATATCTGGAC
TGTAGCCGGAGGTGTGTAGC

Downstream 100 bases:

>100_bases
CCTATACAGTCACAACAATACCCCATAAGTCTATTTTTACGTCTAACCAACCTCCTCCCGCCAAGGGCTTCAGTATCTTG
CAAGGCAAGATACCGGTTTC

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGYVRWLGHAAFEISIDGYTVLIDPWLTNPLSPVKVEDYRDKVDLIIVTHDHGDHLGESVELLRINRRARFVAVYELANY
VAEQLGGATDRVIGANIGGPVRIPDINLKVMFFPATHSSSRGTPTGVLIVGKETSIYHAGDTGLAAEMALVGELYSPKIA
LVPIGGHFTMDAYQAAKAIEMLRAKVVIPMHYNTFPVIRADPEELKRYVDEFKLDAKVVVLKPGELYQF

Sequences:

>Translated_229_residues
MGYVRWLGHAAFEISIDGYTVLIDPWLTNPLSPVKVEDYRDKVDLIIVTHDHGDHLGESVELLRINRRARFVAVYELANY
VAEQLGGATDRVIGANIGGPVRIPDINLKVMFFPATHSSSRGTPTGVLIVGKETSIYHAGDTGLAAEMALVGELYSPKIA
LVPIGGHFTMDAYQAAKAIEMLRAKVVIPMHYNTFPVIRADPEELKRYVDEFKLDAKVVVLKPGELYQF
>Mature_228_residues
GYVRWLGHAAFEISIDGYTVLIDPWLTNPLSPVKVEDYRDKVDLIIVTHDHGDHLGESVELLRINRRARFVAVYELANYV
AEQLGGATDRVIGANIGGPVRIPDINLKVMFFPATHSSSRGTPTGVLIVGKETSIYHAGDTGLAAEMALVGELYSPKIAL
VPIGGHFTMDAYQAAKAIEMLRAKVVIPMHYNTFPVIRADPEELKRYVDEFKLDAKVVVLKPGELYQF

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family

Homologues:

Organism=Caenorhabditis elegans, GI17543104, Length=269, Percent_Identity=24.907063197026, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y886_HYPBU (A2BL74)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001013080.1
- ProteinModelPortal:   A2BL74
- STRING:   A2BL74
- GeneID:   4782563
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0886
- eggNOG:   arNOG08649
- HOGENOM:   HBG741314
- OMA:   FPIIDQT
- BioCyc:   HBUT415426:HBUT_0886-MONOMER
- HAMAP:   MF_00457
- InterPro:   IPR001279
- InterPro:   IPR022877
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 25347; Mature: 25215

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYVRWLGHAAFEISIDGYTVLIDPWLTNPLSPVKVEDYRDKVDLIIVTHDHGDHLGESV
CCHHHEECCEEEEEEECCEEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCE
ELLRINRRARFVAVYELANYVAEQLGGATDRVIGANIGGPVRIPDINLKVMFFPATHSSS
EEEEECCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCCC
RGTPTGVLIVGKETSIYHAGDTGLAAEMALVGELYSPKIALVPIGGHFTMDAYQAAKAIE
CCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHH
MLRAKVVIPMHYNTFPVIRADPEELKRYVDEFKLDAKVVVLKPGELYQF
HHHHEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCC
>Mature Secondary Structure 
GYVRWLGHAAFEISIDGYTVLIDPWLTNPLSPVKVEDYRDKVDLIIVTHDHGDHLGESV
CHHHEECCEEEEEEECCEEEEEECCCCCCCCCCEECCCCCCEEEEEEEECCCCCCCCCE
ELLRINRRARFVAVYELANYVAEQLGGATDRVIGANIGGPVRIPDINLKVMFFPATHSSS
EEEEECCCEEEEEHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCCEEEEEEECCCCCC
RGTPTGVLIVGKETSIYHAGDTGLAAEMALVGELYSPKIALVPIGGHFTMDAYQAAKAIE
CCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHH
MLRAKVVIPMHYNTFPVIRADPEELKRYVDEFKLDAKVVVLKPGELYQF
HHHHEEEEEEECCCEEEEECCHHHHHHHHHHHCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA