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The map label for this gene is pfdB [H]

Identifier: 124027460

GI number: 124027460

Start: 545980

End: 546360

Strand: Direct

Name: pfdB [H]

Synonym: Hbut_0575

Alternate gene names: 124027460

Gene position: 545980-546360 (Clockwise)

Preceding gene: 124027459

Following gene: 124027461

Centisome position: 32.75

GC content: 54.86

Gene sequence:

>381_bases
TTGGCGCAGCGTCTACCCCCCGAGTTGGAGAACAAGCTTGTCCGGCTACAGACGCTACAAGCACAGTACAATAAGATACT
GCAGGAGAGGGCTACGGTGGAGAGCGAGATAGCCGAAACACAGCGCGCAATAAAGCTCATCGAGGAGGCTGGTGAAAACG
CACCAGTATATCGGATGGAGGCAAACGTAATGGTAAGGGTTGACCGGGCTAAGCTGCTCCAGGAGCTCAAGGACCGCCTC
GAAATACTGGAGCTGAGGCTGCAGAGGCTTAAGAAGCAGGAGGAGGAGATTAGGAAACAGTTAGACACGTTAGCCAAGGA
GATAAGGGAGCTACAGACGAAGCTAGCCCTAGGCAAGCAGGCAGGCGCAGGAGCGAGCTAG

Upstream 100 bases:

>100_bases
GAGGCACGTGACCTAGCTGCAGCACGTACATTGGCAAACACTTATCTCAGCCTAGCAGCGACAACAGTCGAGGTGGTTGC
GGCTACAGGTGGGTAGGGCC

Downstream 100 bases:

>100_bases
TATCTCCCCACGAGTTCCTAGGAGGATGGGTGAGCAGACAGTACGTGTTTTTTAGCTGAGAATACCCCTTAAACCCGGGC
TCTGTGTCTCCCGTTCCGTT

Product: prefoldin beta subunit

Products: NA

Alternate protein names: GimC subunit beta [H]

Number of amino acids: Translated: 126; Mature: 125

Protein sequence:

>126_residues
MAQRLPPELENKLVRLQTLQAQYNKILQERATVESEIAETQRAIKLIEEAGENAPVYRMEANVMVRVDRAKLLQELKDRL
EILELRLQRLKKQEEEIRKQLDTLAKEIRELQTKLALGKQAGAGAS

Sequences:

>Translated_126_residues
MAQRLPPELENKLVRLQTLQAQYNKILQERATVESEIAETQRAIKLIEEAGENAPVYRMEANVMVRVDRAKLLQELKDRL
EILELRLQRLKKQEEEIRKQLDTLAKEIRELQTKLALGKQAGAGAS
>Mature_125_residues
AQRLPPELENKLVRLQTLQAQYNKILQERATVESEIAETQRAIKLIEEAGENAPVYRMEANVMVRVDRAKLLQELKDRLE
ILELRLQRLKKQEEEIRKQLDTLAKEIRELQTKLALGKQAGAGAS

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1382

COG function: function code O; Prefoldin, chaperonin cofactor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin subunit beta family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012713
- InterPro:   IPR002777
- InterPro:   IPR009053 [H]

Pfam domain/function: PF01920 Prefoldin_2 [H]

EC number: NA

Molecular weight: Translated: 14530; Mature: 14399

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQRLPPELENKLVRLQTLQAQYNKILQERATVESEIAETQRAIKLIEEAGENAPVYRME
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
ANVMVRVDRAKLLQELKDRLEILELRLQRLKKQEEEIRKQLDTLAKEIRELQTKLALGKQ
CHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGAGAS
CCCCCC
>Mature Secondary Structure 
AQRLPPELENKLVRLQTLQAQYNKILQERATVESEIAETQRAIKLIEEAGENAPVYRME
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
ANVMVRVDRAKLLQELKDRLEILELRLQRLKKQEEEIRKQLDTLAKEIRELQTKLALGKQ
CHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGAGAS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11572479 [H]