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The map label for this gene is rnp2 [H]

Identifier: 124027441

GI number: 124027441

Start: 531803

End: 532372

Strand: Direct

Name: rnp2 [H]

Synonym: Hbut_0556

Alternate gene names: 124027441

Gene position: 531803-532372 (Clockwise)

Preceding gene: 124027440

Following gene: 124027442

Centisome position: 31.9

GC content: 54.04

Gene sequence:

>570_bases
GTGACGTTGTGGGAGGCTATACTTATGGGTATTGTTGCGGTATTGTTGGTGCTAGTTTACCTCCTCAACCGCCGTGTCTC
GGGGCTGACAGGGGCCCTTGGAGAGTTCCGGGCTAGGCTTGGCGAGCTAGAAGAGTCCTTCAATAATGTATTGAGAGAGC
TGGGGTTTGTCTCCAGGTCCCTCAGCACGGCTCTCCAGAGTATCGAGGCTGAGGATGCGCTTGAGAGGCTTAGAAGGCGC
CGGCGGAGACGCTACATAGCCTTTTACGTTGTGTATGAGGGTGATTCTCCCCCGCAGGCAGAAGAAGTGGAGAAGGCTAT
TGTTAGGGCTGTTGAGAGGCTTGCTGGGCAGCTAACGGTGGCACTTGCGAGGCTCCAGCTCGTATACTATGACCATGTTC
GCGGTGCTGGCATTGTTAGAGCAACAAATGATACCAAGTATGTTGTGCTCGCAGCTATGGGGTTGGTGCGGAGCATTGGT
GGCCGCAGAGTATTATTGGTGCCTGTTAGGACTACGGGAACCATTAAGAGGGCTAAGAAGGCGCTAGCTGTTCCCAGGAG
ACTGCTATGA

Upstream 100 bases:

>100_bases
CCCTGAGAATATTGCTAAGCTAGCCGTGACTGGATATCCACGCAGTATTGTTAGGCTAAAGGCTCTCAAGTCCCTAGCTA
GCGAGGGGTGACTCTACGCC

Downstream 100 bases:

>100_bases
CGCTGCGGAGGCCCTACACCGTCATATTCTCCACGATGACTCTTGACGGTCGCTTAGCATCATCGACGGGCTATAGTGTG
CTCAGCTGCCCATACGATTT

Product: RNase P

Products: NA

Alternate protein names: RNase P component 2 [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTLWEAILMGIVAVLLVLVYLLNRRVSGLTGALGEFRARLGELEESFNNVLRELGFVSRSLSTALQSIEAEDALERLRRR
RRRRYIAFYVVYEGDSPPQAEEVEKAIVRAVERLAGQLTVALARLQLVYYDHVRGAGIVRATNDTKYVVLAAMGLVRSIG
GRRVLLVPVRTTGTIKRAKKALAVPRRLL

Sequences:

>Translated_189_residues
MTLWEAILMGIVAVLLVLVYLLNRRVSGLTGALGEFRARLGELEESFNNVLRELGFVSRSLSTALQSIEAEDALERLRRR
RRRRYIAFYVVYEGDSPPQAEEVEKAIVRAVERLAGQLTVALARLQLVYYDHVRGAGIVRATNDTKYVVLAAMGLVRSIG
GRRVLLVPVRTTGTIKRAKKALAVPRRLL
>Mature_188_residues
TLWEAILMGIVAVLLVLVYLLNRRVSGLTGALGEFRARLGELEESFNNVLRELGFVSRSLSTALQSIEAEDALERLRRRR
RRRYIAFYVVYEGDSPPQAEEVEKAIVRAVERLAGQLTVALARLQLVYYDHVRGAGIVRATNDTKYVVLAAMGLVRSIGG
RRVLLVPVRTTGTIKRAKKALAVPRRLL

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends [H]

COG id: COG1369

COG function: function code J; RNase P/RNase MRP subunit POP5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002759 [H]

Pfam domain/function: PF01900 RNase_P_Rpp14 [H]

EC number: =3.1.26.5 [H]

Molecular weight: Translated: 21158; Mature: 21027

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLWEAILMGIVAVLLVLVYLLNRRVSGLTGALGEFRARLGELEESFNNVLRELGFVSRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTALQSIEAEDALERLRRRRRRRYIAFYVVYEGDSPPQAEEVEKAIVRAVERLAGQLTV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALARLQLVYYDHVRGAGIVRATNDTKYVVLAAMGLVRSIGGRRVLLVPVRTTGTIKRAKK
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
ALAVPRRLL
HHHCHHHCC
>Mature Secondary Structure 
TLWEAILMGIVAVLLVLVYLLNRRVSGLTGALGEFRARLGELEESFNNVLRELGFVSRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSTALQSIEAEDALERLRRRRRRRYIAFYVVYEGDSPPQAEEVEKAIVRAVERLAGQLTV
HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALARLQLVYYDHVRGAGIVRATNDTKYVVLAAMGLVRSIGGRRVLLVPVRTTGTIKRAKK
HHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH
ALAVPRRLL
HHHCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]