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The map label for this gene is rpl24e

Identifier: 124027432

GI number: 124027432

Start: 525604

End: 525789

Strand: Direct

Name: rpl24e

Synonym: Hbut_0547

Alternate gene names: 124027432

Gene position: 525604-525789 (Clockwise)

Preceding gene: 124027431

Following gene: 124027434

Centisome position: 31.53

GC content: 54.3

Gene sequence:

>186_bases
ATGCCAGTCGTGCATACGTGCACTTATTGTGGCCGCTCAATAGAGCCAGGCACCGGCCTAATGTACGTAAAGAATGATGG
TAGTGTGCTATGGTTCTGCAGCAGTAAGTGCTTCAAGCTCTGGCGGATGGGTCGCGATCCCAGGAAGCTAAAGTGGACCG
AGCGCTACACGCAGCTACGCCGTTAG

Upstream 100 bases:

>100_bases
GTAAGGCTGGGTGACATAGTTATACTCCGCGAGACAGAGCGCGAAGCTAGGAGACTTGGCAGGAGGAGGTAGAGGAGCGG
CGTAGCGAGGTGATGAGTAG

Downstream 100 bases:

>100_bases
CTGGGTCTTTTCCCAGCCATCTCCAAAGGAGAGGGGCAGCTTCTCCTACCTATGCGCTAGGCTTGCTAGGACTAGTCCTG
TGAGCACCAATAGGCCCCCA

Product: 50S ribosomal protein L24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MPVVHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQLRR

Sequences:

>Translated_61_residues
MPVVHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQLRR
>Mature_60_residues
PVVHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQLRR

Specific function: Binds to the 23S rRNA

COG id: COG2075

COG function: function code J; Ribosomal protein L24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24E_HYPBU (A2BK96)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001012752.1
- ProteinModelPortal:   A2BK96
- SMR:   A2BK96
- STRING:   A2BK96
- GeneID:   4782077
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0547
- eggNOG:   arNOG12662
- HOGENOM:   HBG499845
- OMA:   GTGKMFV
- ProtClustDB:   PRK00807
- BioCyc:   HBUT415426:HBUT_0547-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00773
- InterPro:   IPR000988
- InterPro:   IPR011017
- Gene3D:   G3DSA:2.30.170.20
- PANTHER:   PTHR10792
- SMART:   SM00746

Pfam domain/function: PF01246 Ribosomal_L24e

EC number: NA

Molecular weight: Translated: 7275; Mature: 7143

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: PS01073 RIBOSOMAL_L24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQLR
CCCEECCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHC
R
C
>Mature Secondary Structure 
PVVHTCTYCGRSIEPGTGLMYVKNDGSVLWFCSSKCFKLWRMGRDPRKLKWTERYTQLR
CCEECCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA