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The map label for this gene is rps24e [H]

Identifier: 124027327

GI number: 124027327

Start: 422853

End: 423221

Strand: Reverse

Name: rps24e [H]

Synonym: Hbut_0436

Alternate gene names: 124027327

Gene position: 423221-422853 (Counterclockwise)

Preceding gene: 124027328

Following gene: 124027326

Centisome position: 25.39

GC content: 49.59

Gene sequence:

>369_bases
GTGCCGGCTGACGTGCTTGAAATGTTAAGGCCAAAGAACGCTAAGAAGCTCAACGTAGACCTTGGCGAAGGTTATGAGTT
CTACATAGTACGGGACTGGTATAACCCGCTCATAAAGAGGCGTGAGATAGACGCGGTTATACTCCATGTAGGCAAGTCTA
CGCCTAGCAGGATGAAGCTGCGCATAAAGGTTGCTGAAGCGCTTGGTGTGGATGCGAAGAGAGTGTATATTAGGAAGGTT
CTATCCGAGTATGGTGTTGGTAGGAGTAAGGTCGAGATACATGTTTACGACACGCCCGAGCGCGCGTTGCAGTTCGAGCC
TAAGCACATAATTGAGCGGAACAAGCTTCCTGAGGAGATGGAGGAGTAA

Upstream 100 bases:

>100_bases
ATAAGCATTATAATCCTTGGCTAGCTGATACCGCGCGGGAGTTTAAGAGGGACACTCGGCTCTCAGCTGGCCCCGGGTGG
ATGCTATGGCGGAGTCGGGA

Downstream 100 bases:

>100_bases
GGACACTAATGTGAGGGGTGGAGCCCCATGTCGAAGGAGCTTAAGCTCTATGTGCACAGACTTTACGAGTACGACTACAA
CACTGGCACAATAAAGAGGA

Product: 30S ribosomal protein S24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPADVLEMLRPKNAKKLNVDLGEGYEFYIVRDWYNPLIKRREIDAVILHVGKSTPSRMKLRIKVAEALGVDAKRVYIRKV
LSEYGVGRSKVEIHVYDTPERALQFEPKHIIERNKLPEEMEE

Sequences:

>Translated_122_residues
MPADVLEMLRPKNAKKLNVDLGEGYEFYIVRDWYNPLIKRREIDAVILHVGKSTPSRMKLRIKVAEALGVDAKRVYIRKV
LSEYGVGRSKVEIHVYDTPERALQFEPKHIIERNKLPEEMEE
>Mature_121_residues
PADVLEMLRPKNAKKLNVDLGEGYEFYIVRDWYNPLIKRREIDAVILHVGKSTPSRMKLRIKVAEALGVDAKRVYIRKVL
SEYGVGRSKVEIHVYDTPERALQFEPKHIIERNKLPEEMEE

Specific function: Unknown

COG id: COG2004

COG function: function code J; Ribosomal protein S24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S24e family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012677
- InterPro:   IPR012678
- InterPro:   IPR001976
- InterPro:   IPR018098
- ProDom:   PD006052 [H]

Pfam domain/function: PF01282 Ribosomal_S24e [H]

EC number: NA

Molecular weight: Translated: 14276; Mature: 14145

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPADVLEMLRPKNAKKLNVDLGEGYEFYIVRDWYNPLIKRREIDAVILHVGKSTPSRMKL
CCHHHHHHHCCCCCCEEEEECCCCEEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCEEE
RIKVAEALGVDAKRVYIRKVLSEYGVGRSKVEIHVYDTPERALQFEPKHIIERNKLPEEM
EEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCHHHHHHCCCCHHH
EE
CC
>Mature Secondary Structure 
PADVLEMLRPKNAKKLNVDLGEGYEFYIVRDWYNPLIKRREIDAVILHVGKSTPSRMKL
CHHHHHHHCCCCCCEEEEECCCCEEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCEEE
RIKVAEALGVDAKRVYIRKVLSEYGVGRSKVEIHVYDTPERALQFEPKHIIERNKLPEEM
EEEEHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHCCCCHHHHHHCCCCHHH
EE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]