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The map label for this gene is rps27Ae

Identifier: 124027326

GI number: 124027326

Start: 422637

End: 422825

Strand: Reverse

Name: rps27Ae

Synonym: Hbut_0435

Alternate gene names: 124027326

Gene position: 422825-422637 (Counterclockwise)

Preceding gene: 124027327

Following gene: 124027325

Centisome position: 25.36

GC content: 50.79

Gene sequence:

>189_bases
ATGTCGAAGGAGCTTAAGCTCTATGTGCACAGACTTTACGAGTACGACTACAACACTGGCACAATAAAGAGGAAGAACAA
GATATGTCCACGCTGCGGTAGCTTCATGGCGTTCCACAAGTGGCCGGTGCCGAGGTGGCATTGTGGTAAGTGTGGACACA
CCGAGTTCGTTAGGGAAGCCAAGAGGTGA

Upstream 100 bases:

>100_bases
CGAGCGCGCGTTGCAGTTCGAGCCTAAGCACATAATTGAGCGGAACAAGCTTCCTGAGGAGATGGAGGAGTAAGGACACT
AATGTGAGGGGTGGAGCCCC

Downstream 100 bases:

>100_bases
TCCACGCCAACTATACCGTGTTGGGGGCTGGGACGAGGAGATATACGTTTTAGGGATAGAATCTACAGCACACACTTTTG
GTGTGGGTATAGCCTCGACG

Product: 30S ribosomal protein S27ae

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MSKELKLYVHRLYEYDYNTGTIKRKNKICPRCGSFMAFHKWPVPRWHCGKCGHTEFVREAKR

Sequences:

>Translated_62_residues
MSKELKLYVHRLYEYDYNTGTIKRKNKICPRCGSFMAFHKWPVPRWHCGKCGHTEFVREAKR
>Mature_61_residues
SKELKLYVHRLYEYDYNTGTIKRKNKICPRCGSFMAFHKWPVPRWHCGKCGHTEFVREAKR

Specific function: Unknown

COG id: COG1998

COG function: function code J; Ribosomal protein S27AE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S27Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RS27A_HYPBU (A2BJZ0)

Other databases:

- EMBL:   CP000493
- RefSeq:   YP_001012646.1
- ProteinModelPortal:   A2BJZ0
- STRING:   A2BJZ0
- GeneID:   4782848
- GenomeReviews:   CP000493_GR
- KEGG:   hbu:Hbut_0435
- eggNOG:   arNOG18285
- HOGENOM:   HBG512791
- OMA:   EPVPRWH
- ProtClustDB:   PRK00432
- BioCyc:   HBUT415426:HBUT_0435-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00777
- InterPro:   IPR002906
- InterPro:   IPR022845

Pfam domain/function: PF01599 Ribosomal_S27

EC number: NA

Molecular weight: Translated: 7533; Mature: 7402

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKELKLYVHRLYEYDYNTGTIKRKNKICPRCGSFMAFHKWPVPRWHCGKCGHTEFVREA
CCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH
KR
CC
>Mature Secondary Structure 
SKELKLYVHRLYEYDYNTGTIKRKNKICPRCGSFMAFHKWPVPRWHCGKCGHTEFVREA
CCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHH
KR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA