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The map label for this gene is tldD [C]

Identifier: 124027300

GI number: 124027300

Start: 397114

End: 398478

Strand: Reverse

Name: tldD [C]

Synonym: Hbut_0409

Alternate gene names: 124027300

Gene position: 398478-397114 (Counterclockwise)

Preceding gene: 124027301

Following gene: 124027298

Centisome position: 23.9

GC content: 52.23

Gene sequence:

>1365_bases
GTGTCGGCTCAACGTGTACAGCCCGTTGAAGTGGCTGTGCTCGCGTCTAGGTGGGCTATACGCGAGGGTGCAACAGAAGC
GGAAGCCTATGTAGTTCATGCACGTGGCTACCAAGTGCGCATACTCGCGGGCAAGATTGAAGGGCTTCAATCCAATGACG
ATGTTGGTATCGGTATTAGGGTTGCTGTTGGCAAGAAGATAGGCTTTGCCTACACTACTGGGTTGGATTTGGAGAATATG
CGTAGGGCTGTAAGGGCAGCTGTTAAGCAGGCAAAAGTTGCACCCGAGGATCCCGAGTGGCAAGGCTTGCCCGAGCCTAG
TCAGTCCTATCCGGAGCCAGGCAACATGTACAGCCCGGAGCTGGCTGCTGCTAGTGCTGAGACGGTTATAGAACATGTAC
GCGAGATATTCAGCATTGCCGGAGAATATGAGGGTGTAAGTGTTGCAAGGGGGTCCGTCAGTGTTGAGCGTATCGAGAGA
GCAATAGTAAACACTAACGGCGTCTACCGCGTTGATGTAGGTACGGTGGCAGCTACGCTGGTTGGTGTTAACGCAAGGAA
GAATGGTGTACTCACACCAGTAGTATTCGACTTCGAAGTTAGTAGGGTCTCAATGCCTAGCGCGGAGGTGCTAGTCCGCC
GTGTCGTTGACCGTGTGCTTCAGGCTACCAAGCTTGCCAAAGGTGTTGAGACCGGCAAGTATACGGTGGTACTTGCCCCT
AGCGTGTTCGAGGAGTTGTTGGGCGTAACTGTTCTCTACTCACTACGTGGCGACATTTACGTGCAGGGCAGAAGCTACTA
TGGCGATAAGGTGGGGGAGCAGGCACTCTCCGAGAAAATAACCATAATTGATGACGGTACATTGAAGGGTGGCGACAACA
CCTGGAGATTTGACGGCGAAGGTGTAGCCACTTCGAGGAAGGTGTTGGTTGAGAAGGGTGTCGTGAAGGGTTTCGTGTTC
GACAACTACTGGGGTAGAAGAGCTGGCAATGCCTCAACGGGCAATGCTGTAAGGATAGGCTACAGTTCTATGCCTATACC
AGGCTTTACCAACGTAGTTGTAGAGCCGGGTGATGCACTGATGGAAGAACTCTTTGAGGGCAAGGTGTTGGTCGTATATC
AAGTGCAGGGTGCGCACACAGCTAACAGTGAAACAGGCGAGTATAGCGTGCTAGCCAACCCAGCAATATACTTTGAGAAT
GGAGAGCCTAAAGGATGGGTTAGGGGTGCAATGATCTCTGGTAACTTCTACAGAGAGCTAAGGGATAACGTGGAATTGCT
TGGCAAGACTGTAGAGCGGGCAGGCTTTGGCAGGTATGCGCCGTGGATAAGGCTGTCAGGGATAACAGTAGCTGTCAAGG
CCTAG

Upstream 100 bases:

>100_bases
ACGCGTTAAGAAGATGACCGTGGGAGGTCGCGAGTAGGCCTCCATGCATTCCTTTCTGTGTTCACATCTGTTTGAGCCGT
GCTATGTGGGGTGTATGGGT

Downstream 100 bases:

>100_bases
CAGTAAACATACCTAACATCAAGCACAATAGGACCGGAGAAACGGTACTCTATCAGTAAGACGGTGTCGCTCCTACAAGC
CCAGAGGGGGTTTTCGTCAA

Product: Zn-dependent protease TldD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSAQRVQPVEVAVLASRWAIREGATEAEAYVVHARGYQVRILAGKIEGLQSNDDVGIGIRVAVGKKIGFAYTTGLDLENM
RRAVRAAVKQAKVAPEDPEWQGLPEPSQSYPEPGNMYSPELAAASAETVIEHVREIFSIAGEYEGVSVARGSVSVERIER
AIVNTNGVYRVDVGTVAATLVGVNARKNGVLTPVVFDFEVSRVSMPSAEVLVRRVVDRVLQATKLAKGVETGKYTVVLAP
SVFEELLGVTVLYSLRGDIYVQGRSYYGDKVGEQALSEKITIIDDGTLKGGDNTWRFDGEGVATSRKVLVEKGVVKGFVF
DNYWGRRAGNASTGNAVRIGYSSMPIPGFTNVVVEPGDALMEELFEGKVLVVYQVQGAHTANSETGEYSVLANPAIYFEN
GEPKGWVRGAMISGNFYRELRDNVELLGKTVERAGFGRYAPWIRLSGITVAVKA

Sequences:

>Translated_454_residues
MSAQRVQPVEVAVLASRWAIREGATEAEAYVVHARGYQVRILAGKIEGLQSNDDVGIGIRVAVGKKIGFAYTTGLDLENM
RRAVRAAVKQAKVAPEDPEWQGLPEPSQSYPEPGNMYSPELAAASAETVIEHVREIFSIAGEYEGVSVARGSVSVERIER
AIVNTNGVYRVDVGTVAATLVGVNARKNGVLTPVVFDFEVSRVSMPSAEVLVRRVVDRVLQATKLAKGVETGKYTVVLAP
SVFEELLGVTVLYSLRGDIYVQGRSYYGDKVGEQALSEKITIIDDGTLKGGDNTWRFDGEGVATSRKVLVEKGVVKGFVF
DNYWGRRAGNASTGNAVRIGYSSMPIPGFTNVVVEPGDALMEELFEGKVLVVYQVQGAHTANSETGEYSVLANPAIYFEN
GEPKGWVRGAMISGNFYRELRDNVELLGKTVERAGFGRYAPWIRLSGITVAVKA
>Mature_453_residues
SAQRVQPVEVAVLASRWAIREGATEAEAYVVHARGYQVRILAGKIEGLQSNDDVGIGIRVAVGKKIGFAYTTGLDLENMR
RAVRAAVKQAKVAPEDPEWQGLPEPSQSYPEPGNMYSPELAAASAETVIEHVREIFSIAGEYEGVSVARGSVSVERIERA
IVNTNGVYRVDVGTVAATLVGVNARKNGVLTPVVFDFEVSRVSMPSAEVLVRRVVDRVLQATKLAKGVETGKYTVVLAPS
VFEELLGVTVLYSLRGDIYVQGRSYYGDKVGEQALSEKITIIDDGTLKGGDNTWRFDGEGVATSRKVLVEKGVVKGFVFD
NYWGRRAGNASTGNAVRIGYSSMPIPGFTNVVVEPGDALMEELFEGKVLVVYQVQGAHTANSETGEYSVLANPAIYFENG
EPKGWVRGAMISGNFYRELRDNVELLGKTVERAGFGRYAPWIRLSGITVAVKA

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789640, Length=436, Percent_Identity=25.2293577981651, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1790682, Length=422, Percent_Identity=25.5924170616114, Blast_Score=75, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 49160; Mature: 49029

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQRVQPVEVAVLASRWAIREGATEAEAYVVHARGYQVRILAGKIEGLQSNDDVGIGIR
CCCCCCCCHHEEEHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCCEEEE
VAVGKKIGFAYTTGLDLENMRRAVRAAVKQAKVAPEDPEWQGLPEPSQSYPEPGNMYSPE
EEECCEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LAAASAETVIEHVREIFSIAGEYEGVSVARGSVSVERIERAIVNTNGVYRVDVGTVAATL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHEEHH
VGVNARKNGVLTPVVFDFEVSRVSMPSAEVLVRRVVDRVLQATKLAKGVETGKYTVVLAP
EECCCCCCCCEEEEEEEEEECEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECH
SVFEELLGVTVLYSLRGDIYVQGRSYYGDKVGEQALSEKITIIDDGTLKGGDNTWRFDGE
HHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHCCEEEEECCEEECCCCEEEECCC
GVATSRKVLVEKGVVKGFVFDNYWGRRAGNASTGNAVRIGYSSMPIPGFTNVVVEPGDAL
CCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHH
MEELFEGKVLVVYQVQGAHTANSETGEYSVLANPAIYFENGEPKGWVRGAMISGNFYREL
HHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEECCHHHHHH
RDNVELLGKTVERAGFGRYAPWIRLSGITVAVKA
HHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEC
>Mature Secondary Structure 
SAQRVQPVEVAVLASRWAIREGATEAEAYVVHARGYQVRILAGKIEGLQSNDDVGIGIR
CCCCCCCHHEEEHHHHHHHHCCCCCCEEEEEEECCEEEEEEEEEECCCCCCCCCCEEEE
VAVGKKIGFAYTTGLDLENMRRAVRAAVKQAKVAPEDPEWQGLPEPSQSYPEPGNMYSPE
EEECCEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LAAASAETVIEHVREIFSIAGEYEGVSVARGSVSVERIERAIVNTNGVYRVDVGTVAATL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHEEHH
VGVNARKNGVLTPVVFDFEVSRVSMPSAEVLVRRVVDRVLQATKLAKGVETGKYTVVLAP
EECCCCCCCCEEEEEEEEEECEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECH
SVFEELLGVTVLYSLRGDIYVQGRSYYGDKVGEQALSEKITIIDDGTLKGGDNTWRFDGE
HHHHHHHHHHEEEEECCCEEEECCCCCCHHHHHHHHHCCEEEEECCEEECCCCEEEECCC
GVATSRKVLVEKGVVKGFVFDNYWGRRAGNASTGNAVRIGYSSMPIPGFTNVVVEPGDAL
CCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEECCCHHH
MEELFEGKVLVVYQVQGAHTANSETGEYSVLANPAIYFENGEPKGWVRGAMISGNFYREL
HHHHHCCCEEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCEEEEEEECCHHHHHH
RDNVELLGKTVERAGFGRYAPWIRLSGITVAVKA
HHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]