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The map label for this gene is pgtC [H]

Identifier: 124027298

GI number: 124027298

Start: 394879

End: 396255

Strand: Reverse

Name: pgtC [H]

Synonym: Hbut_0407

Alternate gene names: 124027298

Gene position: 396255-394879 (Counterclockwise)

Preceding gene: 124027300

Following gene: 124027297

Centisome position: 23.77

GC content: 50.98

Gene sequence:

>1377_bases
ATGGTGTCGCAGCGCCTCCTCCTAACTAGTGCAGCTATAATAGCCATAATGATAGTTATAGCTGTAGCTATTCTCTATAT
GCAGGGGGGAGAAACGGGGGCCCAAGGTGTAAAGCTGGTAATTGTTACCAGGCTTTCGCCCGAGGAGCAACAAGCTCTTC
GTGAGGCATTTCTCAACAGTAGCATAGCGAGGGAGTACGGTATAGCAGATGTGGAGTTTAGGAAGCTGGACTATGCACAG
TGGCCAAGTCTTGCCGAGAGCGGAGAGGTGGATGGATTCTTCATAGGCGAGAAGCCTGTCTACGATAGACTCTGCAGTGA
GGGCCATCTAGCACCACTAACGTTGGATGAACTCCTAGACATCGTAGGGGAGCTTGACGAGAGGTACCTGGGTAGGGCGA
GTAGCAGCGAGATTTGCTGGGTTGCAGTTGGCCAAGCAGTCTACGGCTTCATAGTAAACAAGGTGTTCCTTGAAAGGTAC
GGTCTGCCGGAGCCCAGAACCTGGGGCGACCTCGTGAACCCAATATACCTCCGGCCGCTGGTTGAGGAGGTCTACATGGT
GTCCTTCCCAAGGCCGAGTAAGAGTGGTACAGCACGGACAATAGTGCATGGCATACTGCAAAAGTATGGCTGGGAGAGGG
GCTGGCAACTCCTCACAGTTATAGGTATGGAGGCTGGTATTGTTGATAGTTCCGAGTTAGCCCGTGATCAAGCAGCCGAG
GGTTTGGTGGGTGTAGCACCGGCATACATAGGTTATGGTATTGAGGCTGAGAAGCAGGGTAGGGGCGCGGTCTTCAGAGT
GCCGGAGGGTGAGGGCATACTGTATATCTCTATAGCGGCTGTAGCGAAGGCTAGTAAGCATAAAGAGCAGATGCAGGCAT
TCATACTCTGGCTGCTAAGCGATGAGGGTCAGCGTGCACTAGCAAGGCTATTTTACTACATACCTGTGAGGCCAGTTTCC
GGCATAGACTGGGTCGAAAGGATCTACAGCGAGTTGAGGAACAACATATTCGAGTACAACCGCACATTAGCCTCAGAGGT
AGACCTGGCAGTTACAACTTACTTTGAGGCAACAATAGCCGACCCTGCCGCCAACAAGCTGCTCAAACGTATTGGTAAGC
TATTAGCACAGCTCTATGAAGAGGGCAAGATAGACGAGAACGGCTATGCAGACATACTGGCAAAGCTTGGCTCACCGCTA
AGGATAAAGGATCCATGGAGTGGCGAGGAGGTTGTATTTACTCTAGAGTATGCAAAGAAGATAAACTCCAAACTTAGAAG
CTCCGAGGACAGAGACAAGTTCTACAACGCAGTAAAAACTGTAGCCCTAGAACAGTACAGGTCTATACTGTCTGAGCTCG
AGAAGCTCGCTGGGTAG

Upstream 100 bases:

>100_bases
TTCCTTCACCTATGCTCTGCCCGCGCGATACAAGCATTAGAGTGTTATCTATACGTTTATAATTCCGGTTTTGCTTTGCT
CGTGCACTGGTGGTAAGTAT

Downstream 100 bases:

>100_bases
AAGCGTGTATGAAGCCCTCACAGCGTCTATTTTTCGTGTTACCCGCACTACTACTCATAGCTCTTATAGTGATTATACCT
CTGGCTCTCCTTCTCTCGCC

Product: ABC-type Fe3+ transport system, periplasmic component, AfuA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MVSQRLLLTSAAIIAIMIVIAVAILYMQGGETGAQGVKLVIVTRLSPEEQQALREAFLNSSIAREYGIADVEFRKLDYAQ
WPSLAESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDELLDIVGELDERYLGRASSSEICWVAVGQAVYGFIVNKVFLERY
GLPEPRTWGDLVNPIYLRPLVEEVYMVSFPRPSKSGTARTIVHGILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAE
GLVGVAPAYIGYGIEAEKQGRGAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLSDEGQRALARLFYYIPVRPVS
GIDWVERIYSELRNNIFEYNRTLASEVDLAVTTYFEATIADPAANKLLKRIGKLLAQLYEEGKIDENGYADILAKLGSPL
RIKDPWSGEEVVFTLEYAKKINSKLRSSEDRDKFYNAVKTVALEQYRSILSELEKLAG

Sequences:

>Translated_458_residues
MVSQRLLLTSAAIIAIMIVIAVAILYMQGGETGAQGVKLVIVTRLSPEEQQALREAFLNSSIAREYGIADVEFRKLDYAQ
WPSLAESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDELLDIVGELDERYLGRASSSEICWVAVGQAVYGFIVNKVFLERY
GLPEPRTWGDLVNPIYLRPLVEEVYMVSFPRPSKSGTARTIVHGILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAE
GLVGVAPAYIGYGIEAEKQGRGAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLSDEGQRALARLFYYIPVRPVS
GIDWVERIYSELRNNIFEYNRTLASEVDLAVTTYFEATIADPAANKLLKRIGKLLAQLYEEGKIDENGYADILAKLGSPL
RIKDPWSGEEVVFTLEYAKKINSKLRSSEDRDKFYNAVKTVALEQYRSILSELEKLAG
>Mature_458_residues
MVSQRLLLTSAAIIAIMIVIAVAILYMQGGETGAQGVKLVIVTRLSPEEQQALREAFLNSSIAREYGIADVEFRKLDYAQ
WPSLAESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDELLDIVGELDERYLGRASSSEICWVAVGQAVYGFIVNKVFLERY
GLPEPRTWGDLVNPIYLRPLVEEVYMVSFPRPSKSGTARTIVHGILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAE
GLVGVAPAYIGYGIEAEKQGRGAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLSDEGQRALARLFYYIPVRPVS
GIDWVERIYSELRNNIFEYNRTLASEVDLAVTTYFEATIADPAANKLLKRIGKLLAQLYEEGKIDENGYADILAKLGSPL
RIKDPWSGEEVVFTLEYAKKINSKLRSSEDRDKFYNAVKTVALEQYRSILSELEKLAG

Specific function: Required for pgtP expression, it may act jointly with the pgtA/pgtB signaling proteins [H]

COG id: COG1840

COG function: function code P; ABC-type Fe3+ transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51051; Mature: 51051

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSQRLLLTSAAIIAIMIVIAVAILYMQGGETGAQGVKLVIVTRLSPEEQQALREAFLNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
SIAREYGIADVEFRKLDYAQWPSLAESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDELLD
HHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHH
IVGELDERYLGRASSSEICWVAVGQAVYGFIVNKVFLERYGLPEPRTWGDLVNPIYLRPL
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH
VEEVYMVSFPRPSKSGTARTIVHGILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHC
GLVGVAPAYIGYGIEAEKQGRGAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLS
CCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DEGQRALARLFYYIPVRPVSGIDWVERIYSELRNNIFEYNRTLASEVDLAVTTYFEATIA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPAANKLLKRIGKLLAQLYEEGKIDENGYADILAKLGSPLRIKDPWSGEEVVFTLEYAKK
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHHH
INSKLRSSEDRDKFYNAVKTVALEQYRSILSELEKLAG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSQRLLLTSAAIIAIMIVIAVAILYMQGGETGAQGVKLVIVTRLSPEEQQALREAFLNS
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHH
SIAREYGIADVEFRKLDYAQWPSLAESGEVDGFFIGEKPVYDRLCSEGHLAPLTLDELLD
HHHHHHCCCCCHHHHCCHHHCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCHHHHHH
IVGELDERYLGRASSSEICWVAVGQAVYGFIVNKVFLERYGLPEPRTWGDLVNPIYLRPL
HHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH
VEEVYMVSFPRPSKSGTARTIVHGILQKYGWERGWQLLTVIGMEAGIVDSSELARDQAAE
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHCCCHHHHHHCCCCCCCCHHHHHHHHHHC
GLVGVAPAYIGYGIEAEKQGRGAVFRVPEGEGILYISIAAVAKASKHKEQMQAFILWLLS
CCHHHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHC
DEGQRALARLFYYIPVRPVSGIDWVERIYSELRNNIFEYNRTLASEVDLAVTTYFEATIA
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPAANKLLKRIGKLLAQLYEEGKIDENGYADILAKLGSPLRIKDPWSGEEVVFTLEYAKK
CHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEECCCCCCCCEEEEHHHHHH
INSKLRSSEDRDKFYNAVKTVALEQYRSILSELEKLAG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]