| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is 124027297
Identifier: 124027297
GI number: 124027297
Start: 393107
End: 394870
Strand: Reverse
Name: 124027297
Synonym: Hbut_0406
Alternate gene names: NA
Gene position: 394870-393107 (Counterclockwise)
Preceding gene: 124027298
Following gene: 124027295
Centisome position: 23.69
GC content: 50.51
Gene sequence:
>1764_bases ATGAAGCCCTCACAGCGTCTATTTTTCGTGTTACCCGCACTACTACTCATAGCTCTTATAGTGATTATACCTCTGGCTCT CCTTCTCTCGCCGAGCCAGCTGGTTAAGGGGCTTAGTCTAGCTCTTAGCGAGCCAGGCTCTATTGCGCCAGTAGTAGGGG TTGAGGAGCCAATTACTGTGGCTGACAAGCCTAACTGTAGATTATTCATTATCAGGGGTGCAGACCTAGGCGTTATACCC AATAGCCTCGTGGTTGCATGCCTTGTATCGCTTGCCTCGACACTCCTTGGCTTGCTAGCTGCTACGGGTATACTCCTATA CCGTCCCTTGAGAATCAGTCTAGTCCTGGCTCTCGTGGCCCTCCTTCCATACCCGTTTGTTGAGGCTTACGTGGTTCAGC GCATATTTAACCCTGATTATGGCCTTGTGAATAGTATCCTCAGACCGTTTGGTTTCTGTATAACCTTCCGCGGCCTTGCA GGTGTTGCAGTATATCAAATAGCTGTGTTTGCGCCGCTAGCACTTATTCTGATATACACATACTCTATTGGTGTTGCACG TGAGGCTTATGAGGCGGCAGTACAGCATGGTGTTTCGCTGCTGCAGCATACTCTACTAACGGCACGTCTCTCCAGACCAG CTGTAGCTGCAAGCATTTCGCTAATCTTTGTCTTGAGCTTGGATGATGTAGCTGGTCCATATGTTTTCCAGCAAGACCCT AGTGCACGCAGTTTGCTCGCCTTTAGGGCTTACAGCTACTTCATGGACACTGTGACCGGTACATTTTCGCTTTCTGCCAT AGGCTACATAGCTATACTGACACTGCTCTCTCTCATAGCTTTCATAGCGGCTTATCCCAGTATAGCTGTTGCCTATAGGG CGGCGCCTGCGGGATCTATGCGCTACCGTGCCCCCCTAGCAATGCTTGACACAAGAGCCCTACCATTCATCGTGGGTGTT GTTGCTGCTGCTCTGCTACCAGCTGCGCTTAAGCTTCTCGCGGTAGCCTATGGTTTCAGTGATAGGTGGGTTGCAGAACT TCTCCCTTCGCCAGGCTTTGGCGGCCTAAGACTGCTCGCTGAGAACCCCGATATAGCGAGGGGGATAGCTAACAGTATTG TCTATACAGTTATCAGCCTTTTACTACTGGCTCCTGTAGCAGTCACGGCAGCCTATGCAGTAGCTAGAGGTTATGGAAGG AGTACAGCTCTCTTTGATGCAGTACTTATGTCGCCGCTGGCTATACCTGGTATAGCTGTTGCGTACGCTGTATTCTTTGC ATACCATGACCTCCTTCGAGGCACGATCCTAGACCCACTTATTACCCCCCAACTATACCTTGTACTAGGCTATGCTGCTA GGAGACTTCCACTATTATACAAGCTGTTCCAGACGGCAATAGCCAGCATACCCTTAGAACTTGAGGAGGTGGCAACAAAC CTTGGAGCAGGTGTAGCCCGCAAGCTAGCAGCTATAGTGGCGCCACTAGCTCTCCAGGCCAGCAGTTATGGTGCTGCCTA CGTAGCTGTGAGTATAGCCTCTGAAGTAAGCCTATCAATAACCATAGGTGGTCTAGGAGGCTCTAGCGGTACAACACATC CTGCTCCTCTCATGTATCTTGTTGCTAGCTATATGGGGTTCGAGGGGCTGAAATATGCTCCAGCACTATCAGCGGCAATG TCAATCCTCTACGCGGCATCGATAGTGCTGGCGTTGGCTGTGTATCGCTTATTCCTCCTCCTGCTCAGGAACAGCTATCG GTAG
Upstream 100 bases:
>100_bases AGGACAGAGACAAGTTCTACAACGCAGTAAAAACTGTAGCCCTAGAACAGTACAGGTCTATACTGTCTGAGCTCGAGAAG CTCGCTGGGTAGAAGCGTGT
Downstream 100 bases:
>100_bases CTTCTTCTTCCAAGCCCTCAACGCTAGTTCGGCTGCAGTCCAGGGCTCCTCAAGCTCTGGCGCCTTCGGGATTGGCTCCA CCCAGACTCTCCGATAAGCC
Product: ABC-type Fe3+ transport permease, ThiP
Products: NA
Alternate protein names: ABC-Type Fe3+ Transport; Ferric Iron ABC Transporter Permease; ABC-Type Fe3+ Transport Permease ThiP; ABC Transporter Permease Protein; Molybdenum Transport System Permease Protein
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MKPSQRLFFVLPALLLIALIVIIPLALLLSPSQLVKGLSLALSEPGSIAPVVGVEEPITVADKPNCRLFIIRGADLGVIP NSLVVACLVSLASTLLGLLAATGILLYRPLRISLVLALVALLPYPFVEAYVVQRIFNPDYGLVNSILRPFGFCITFRGLA GVAVYQIAVFAPLALILIYTYSIGVAREAYEAAVQHGVSLLQHTLLTARLSRPAVAASISLIFVLSLDDVAGPYVFQQDP SARSLLAFRAYSYFMDTVTGTFSLSAIGYIAILTLLSLIAFIAAYPSIAVAYRAAPAGSMRYRAPLAMLDTRALPFIVGV VAAALLPAALKLLAVAYGFSDRWVAELLPSPGFGGLRLLAENPDIARGIANSIVYTVISLLLLAPVAVTAAYAVARGYGR STALFDAVLMSPLAIPGIAVAYAVFFAYHDLLRGTILDPLITPQLYLVLGYAARRLPLLYKLFQTAIASIPLELEEVATN LGAGVARKLAAIVAPLALQASSYGAAYVAVSIASEVSLSITIGGLGGSSGTTHPAPLMYLVASYMGFEGLKYAPALSAAM SILYAASIVLALAVYRLFLLLLRNSYR
Sequences:
>Translated_587_residues MKPSQRLFFVLPALLLIALIVIIPLALLLSPSQLVKGLSLALSEPGSIAPVVGVEEPITVADKPNCRLFIIRGADLGVIP NSLVVACLVSLASTLLGLLAATGILLYRPLRISLVLALVALLPYPFVEAYVVQRIFNPDYGLVNSILRPFGFCITFRGLA GVAVYQIAVFAPLALILIYTYSIGVAREAYEAAVQHGVSLLQHTLLTARLSRPAVAASISLIFVLSLDDVAGPYVFQQDP SARSLLAFRAYSYFMDTVTGTFSLSAIGYIAILTLLSLIAFIAAYPSIAVAYRAAPAGSMRYRAPLAMLDTRALPFIVGV VAAALLPAALKLLAVAYGFSDRWVAELLPSPGFGGLRLLAENPDIARGIANSIVYTVISLLLLAPVAVTAAYAVARGYGR STALFDAVLMSPLAIPGIAVAYAVFFAYHDLLRGTILDPLITPQLYLVLGYAARRLPLLYKLFQTAIASIPLELEEVATN LGAGVARKLAAIVAPLALQASSYGAAYVAVSIASEVSLSITIGGLGGSSGTTHPAPLMYLVASYMGFEGLKYAPALSAAM SILYAASIVLALAVYRLFLLLLRNSYR >Mature_587_residues MKPSQRLFFVLPALLLIALIVIIPLALLLSPSQLVKGLSLALSEPGSIAPVVGVEEPITVADKPNCRLFIIRGADLGVIP NSLVVACLVSLASTLLGLLAATGILLYRPLRISLVLALVALLPYPFVEAYVVQRIFNPDYGLVNSILRPFGFCITFRGLA GVAVYQIAVFAPLALILIYTYSIGVAREAYEAAVQHGVSLLQHTLLTARLSRPAVAASISLIFVLSLDDVAGPYVFQQDP SARSLLAFRAYSYFMDTVTGTFSLSAIGYIAILTLLSLIAFIAAYPSIAVAYRAAPAGSMRYRAPLAMLDTRALPFIVGV VAAALLPAALKLLAVAYGFSDRWVAELLPSPGFGGLRLLAENPDIARGIANSIVYTVISLLLLAPVAVTAAYAVARGYGR STALFDAVLMSPLAIPGIAVAYAVFFAYHDLLRGTILDPLITPQLYLVLGYAARRLPLLYKLFQTAIASIPLELEEVATN LGAGVARKLAAIVAPLALQASSYGAAYVAVSIASEVSLSITIGGLGGSSGTTHPAPLMYLVASYMGFEGLKYAPALSAAM SILYAASIVLALAVYRLFLLLLRNSYR
Specific function: Unknown
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62052; Mature: 62052
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPSQRLFFVLPALLLIALIVIIPLALLLSPSQLVKGLSLALSEPGSIAPVVGVEEPITV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE ADKPNCRLFIIRGADLGVIPNSLVVACLVSLASTLLGLLAATGILLYRPLRISLVLALVA CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPYPFVEAYVVQRIFNPDYGLVNSILRPFGFCITFRGLAGVAVYQIAVFAPLALILIYT HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSIGVAREAYEAAVQHGVSLLQHTLLTARLSRPAVAASISLIFVLSLDDVAGPYVFQQDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECCCCCCCEECCCC SARSLLAFRAYSYFMDTVTGTFSLSAIGYIAILTLLSLIAFIAAYPSIAVAYRAAPAGSM CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC RYRAPLAMLDTRALPFIVGVVAAALLPAALKLLAVAYGFSDRWVAELLPSPGFGGLRLLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEE ENPDIARGIANSIVYTVISLLLLAPVAVTAAYAVARGYGRSTALFDAVLMSPLAIPGIAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH AYAVFFAYHDLLRGTILDPLITPQLYLVLGYAARRLPLLYKLFQTAIASIPLELEEVATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGAGVARKLAAIVAPLALQASSYGAAYVAVSIASEVSLSITIGGLGGSSGTTHPAPLMYL HCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH VASYMGFEGLKYAPALSAAMSILYAASIVLALAVYRLFLLLLRNSYR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPSQRLFFVLPALLLIALIVIIPLALLLSPSQLVKGLSLALSEPGSIAPVVGVEEPITV CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEE ADKPNCRLFIIRGADLGVIPNSLVVACLVSLASTLLGLLAATGILLYRPLRISLVLALVA CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLPYPFVEAYVVQRIFNPDYGLVNSILRPFGFCITFRGLAGVAVYQIAVFAPLALILIYT HCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSIGVAREAYEAAVQHGVSLLQHTLLTARLSRPAVAASISLIFVLSLDDVAGPYVFQQDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECCCCCCCEECCCC SARSLLAFRAYSYFMDTVTGTFSLSAIGYIAILTLLSLIAFIAAYPSIAVAYRAAPAGSM CHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC RYRAPLAMLDTRALPFIVGVVAAALLPAALKLLAVAYGFSDRWVAELLPSPGFGGLRLLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEE ENPDIARGIANSIVYTVISLLLLAPVAVTAAYAVARGYGRSTALFDAVLMSPLAIPGIAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH AYAVFFAYHDLLRGTILDPLITPQLYLVLGYAARRLPLLYKLFQTAIASIPLELEEVATN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LGAGVARKLAAIVAPLALQASSYGAAYVAVSIASEVSLSITIGGLGGSSGTTHPAPLMYL HCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEECCCCEEEEEEECCCCCCCCCCCHHHHHH VASYMGFEGLKYAPALSAAMSILYAASIVLALAVYRLFLLLLRNSYR HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA