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The map label for this gene is ygcF [C]

Identifier: 124027076

GI number: 124027076

Start: 161373

End: 162080

Strand: Direct

Name: ygcF [C]

Synonym: Hbut_0179

Alternate gene names: 124027076

Gene position: 161373-162080 (Clockwise)

Preceding gene: 124027075

Following gene: 124027077

Centisome position: 9.68

GC content: 58.76

Gene sequence:

>708_bases
ATGTCGAGGTCTGCGAGACGGAAAACCTCTGCATTGAATACCGTCCTCCGCGTCGTGGAGGTTTTCGCTAGTATTCAGGG
AGAGGGCCCCTTCACTGGCACGTACAGCGTCTTCGTACGGCTCGCAGGGTGCAACCTCCGCTGCCCCTTCTGCGACACGA
GGTACGCCTGGAGCCTCGAAGCCGGAAAGCCACTAGGGGTGGAGGAGCTGGTAGAGGAGATAGCTAGGTACGAGCCGAGC
CTAGTAGTGATAACTGGTGGGGAGCCCCTGCTCCAGAGACACCCACTCAACAGCCTCGTAGAGGGGCTGGAGAGCCTGGG
GCTCCGCGTCCAGCTGGAGACCAATGGTATTCTCCCGGCGCCAGCTAGGGATGAGCAGCTCTGGAGAGTGTACCATGTTG
TTTCGCCAAAGGATGTACCGGTACGCGTGCCTGGAGCAAAGCTCCATCCCAGCTGGGTGGACTACGCGAGAGCGACCGGG
AGGGCGTGGTTCAAGTTCCTAGTGGCTAACGAACAGCATGTGCGAGAGGTAGCAGAGTACGTGGCGAAGCTAGGTATTCC
TAGGAGCCGCGTCTACATAATGCCGCTAACGCCCGAGAAGCTGGACATGAAGGAGCTGCTAGAGCTGCACAGTAGGATAG
CAAGCTTGGCGGTAAAGTGGAGGCTAAACTTTAGCCCGAGGCTACACCTCCTCGTACAGCTACCCTAG

Upstream 100 bases:

>100_bases
GCAGCCCCAGATAAAGATGAGAAGCTTGTTGTCACTAGCGAGGAACTCGCAGTACTCATAGCCGATATGTTGGAGCAGGC
TTTCCCTGGGAGGGTAGAGT

Downstream 100 bases:

>100_bases
CCTCTCCTACTAGGTTGCCTACACAACGTATATACCGAGCGAGGGTACAGCCTAACCGTCTTTACCGGACGTTATAGAGG
CTCCTAGCTCCGGGGTGTAG

Product: organic radical activating protein NrdG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MSRSARRKTSALNTVLRVVEVFASIQGEGPFTGTYSVFVRLAGCNLRCPFCDTRYAWSLEAGKPLGVEELVEEIARYEPS
LVVITGGEPLLQRHPLNSLVEGLESLGLRVQLETNGILPAPARDEQLWRVYHVVSPKDVPVRVPGAKLHPSWVDYARATG
RAWFKFLVANEQHVREVAEYVAKLGIPRSRVYIMPLTPEKLDMKELLELHSRIASLAVKWRLNFSPRLHLLVQLP

Sequences:

>Translated_235_residues
MSRSARRKTSALNTVLRVVEVFASIQGEGPFTGTYSVFVRLAGCNLRCPFCDTRYAWSLEAGKPLGVEELVEEIARYEPS
LVVITGGEPLLQRHPLNSLVEGLESLGLRVQLETNGILPAPARDEQLWRVYHVVSPKDVPVRVPGAKLHPSWVDYARATG
RAWFKFLVANEQHVREVAEYVAKLGIPRSRVYIMPLTPEKLDMKELLELHSRIASLAVKWRLNFSPRLHLLVQLP
>Mature_234_residues
SRSARRKTSALNTVLRVVEVFASIQGEGPFTGTYSVFVRLAGCNLRCPFCDTRYAWSLEAGKPLGVEELVEEIARYEPSL
VVITGGEPLLQRHPLNSLVEGLESLGLRVQLETNGILPAPARDEQLWRVYHVVSPKDVPVRVPGAKLHPSWVDYARATGR
AWFKFLVANEQHVREVAEYVAKLGIPRSRVYIMPLTPEKLDMKELLELHSRIASLAVKWRLNFSPRLHLLVQLP

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI1789139, Length=119, Percent_Identity=36.9747899159664, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 26499; Mature: 26368

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSARRKTSALNTVLRVVEVFASIQGEGPFTGTYSVFVRLAGCNLRCPFCDTRYAWSLE
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCEECCCCCCCEEEEEC
AGKPLGVEELVEEIARYEPSLVVITGGEPLLQRHPLNSLVEGLESLGLRVQLETNGILPA
CCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCC
PARDEQLWRVYHVVSPKDVPVRVPGAKLHPSWVDYARATGRAWFKFLVANEQHVREVAEY
CCCCHHHHHEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VAKLGIPRSRVYIMPLTPEKLDMKELLELHSRIASLAVKWRLNFSPRLHLLVQLP
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECC
>Mature Secondary Structure 
SRSARRKTSALNTVLRVVEVFASIQGEGPFTGTYSVFVRLAGCNLRCPFCDTRYAWSLE
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEECCCEECCCCCCCEEEEEC
AGKPLGVEELVEEIARYEPSLVVITGGEPLLQRHPLNSLVEGLESLGLRVQLETNGILPA
CCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHCCHHHHHHHHHHCCEEEEEECCCCCCC
PARDEQLWRVYHVVSPKDVPVRVPGAKLHPSWVDYARATGRAWFKFLVANEQHVREVAEY
CCCCHHHHHEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VAKLGIPRSRVYIMPLTPEKLDMKELLELHSRIASLAVKWRLNFSPRLHLLVQLP
HHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]