| Definition | Hyperthermus butylicus DSM 5456 chromosome, complete genome. |
|---|---|
| Accession | NC_008818 |
| Length | 1,667,163 |
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The map label for this gene is ypwA [H]
Identifier: 124027063
GI number: 124027063
Start: 149878
End: 151413
Strand: Reverse
Name: ypwA [H]
Synonym: Hbut_0166
Alternate gene names: 124027063
Gene position: 151413-149878 (Counterclockwise)
Preceding gene: 124027066
Following gene: 124027059
Centisome position: 9.08
GC content: 55.08
Gene sequence:
>1536_bases TTGTCCGAGCAGACCCATCTCTTCCAGGACGAGATCGTCAAGAAGATAATTGAGAAGACCCGCGTCCTCTGGGCACTCAA GCACGCCCTAAGCCTCATGAGCTGGGATCTGGAGACATACATGCCCCCGCGCGGCGTAGAGGACCGCTCAGTAGCGTTCG AGGAGCTTGAGGGCCTCCTCCATAGGCTCAGCAGGGATCCGGAGCTTGAGAAGCTTGTGGAGAAGGCTAATGAGAGGCTA GACCAGCTAAACGACTACGAGCGCGGCGTTGTAAGGGTTATGAAGAGGATGCTCCGCATTGTGAAGCTCATACCGGAGGA GCTAGCTAGGAGGGAGGCAAAGGTATCAAGCGAAGCTACGGTGGTCTGGAGGGAGGCCAAGAAGAAGGCTGACTTCAAGA TGTTCGAGCCATATCTAAAGGAGATCGTCGAGATACAGAGGGAGAAGGCTGAACGGTTAGGCTACGAGGAGCACCCCTAC GACGCGCTCCTAGACCTCTACGAAGAGGGACTAAGGACACGCGACATGGAAGCCATCTTCTCCGAGCTAGTCCCCGCAAC CAAAAGGATCCTGGAGAAGGTGCTGAGCGGCGGCTTCTACCCGCAGAATCACCCTCTCGAAGAGGCAAAGTACGATGTGG CCAGGGCGAGGGAGCTCCTCAAATCAATACTTAACGGCTTTGAGTGGCCATGGGATCGTGGCAGGCTCGATGAGTCAGCT CACCCATTCACCATAGAGCTAGGCATGAACGATGTTAGAATAACAGTGCGCTACGAGGGCTATGACATCAAGAGGGCTGT GTATAGCCTCGTGCACGAGTATGGCCACGCCCTCTACGAGCTACAGATAGACCCGAGGATAGCACGCACACCAATAGGCC ACGGTGTCAGCATGGGTGTGCACGAGAGCCAGTCCAGGTTCTGGGAGAACATAGTTGGACGTGGCCCCTGGTTCATACCA TGGCTCAAAGAGAGGATGGACAAAACGATAGGCTACACTAGGGACTACACCCTCCTAGAGCTATATAGGTATGTTAACAC TGTGAAGCCGGGCCTCATAAGGGTTGACGCCGACGAGGTAACCTATAACCTCCACATCTACCTCAGGTTCACGATAGAGA AGAAGCTGATAGAGCAGAGCCTAAACGTTGACGAGGTGCCCCAGGTGTGGGACGACATGATGGAGGAGCTGCTGGGCGTA AGGCCGCGCAATGCTGCTGAGGGCGTGCTACAGGATATACACTGGAGCCACGGGAGTATAGGCTACTTCCCAACCTACAC GCTAGGCAACGTGATAGCAGCAATGATATGGAGAACTCTGTGGAGCCGCAGCCAGGAGCTGCTGCGAGAGCTGAGGCTAG CAGAGCTGCGCAGATGGCTCGGCGAGAACATACACAAGTGGGGTGCAACCTATCCGCCGAAGGAGCTTGTGAAGAGGGTT ATGGGCGAAGAGATAACTGCAGGGCCTCTCATAGAGTATCTGGAGTGGAAGTACCTCAAGCTGCCGGGAGAGGTAGAGGA TTATCTCAAGCCATAG
Upstream 100 bases:
>100_bases CCTAGGCATGACCTAGGCTTCTGCAACCCATCTAATACCTGTCGCGGAAACACCAAAAACCCACAAGGCCCAGCCCGGGA ACGAGCGGAGGAGACCCCCT
Downstream 100 bases:
>100_bases CCTGCTTTTCGAGAAGCCTCCTCACATCCTCGCCGCGGAAGTAGAAGTAGTAGCCGTCACCTGCTTCAACAGCAAACCTT TCAAGCACAGCTAGCTTTTC
Product: carboxypeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSEQTHLFQDEIVKKIIEKTRVLWALKHALSLMSWDLETYMPPRGVEDRSVAFEELEGLLHRLSRDPELEKLVEKANERL DQLNDYERGVVRVMKRMLRIVKLIPEELARREAKVSSEATVVWREAKKKADFKMFEPYLKEIVEIQREKAERLGYEEHPY DALLDLYEEGLRTRDMEAIFSELVPATKRILEKVLSGGFYPQNHPLEEAKYDVARARELLKSILNGFEWPWDRGRLDESA HPFTIELGMNDVRITVRYEGYDIKRAVYSLVHEYGHALYELQIDPRIARTPIGHGVSMGVHESQSRFWENIVGRGPWFIP WLKERMDKTIGYTRDYTLLELYRYVNTVKPGLIRVDADEVTYNLHIYLRFTIEKKLIEQSLNVDEVPQVWDDMMEELLGV RPRNAAEGVLQDIHWSHGSIGYFPTYTLGNVIAAMIWRTLWSRSQELLRELRLAELRRWLGENIHKWGATYPPKELVKRV MGEEITAGPLIEYLEWKYLKLPGEVEDYLKP
Sequences:
>Translated_511_residues MSEQTHLFQDEIVKKIIEKTRVLWALKHALSLMSWDLETYMPPRGVEDRSVAFEELEGLLHRLSRDPELEKLVEKANERL DQLNDYERGVVRVMKRMLRIVKLIPEELARREAKVSSEATVVWREAKKKADFKMFEPYLKEIVEIQREKAERLGYEEHPY DALLDLYEEGLRTRDMEAIFSELVPATKRILEKVLSGGFYPQNHPLEEAKYDVARARELLKSILNGFEWPWDRGRLDESA HPFTIELGMNDVRITVRYEGYDIKRAVYSLVHEYGHALYELQIDPRIARTPIGHGVSMGVHESQSRFWENIVGRGPWFIP WLKERMDKTIGYTRDYTLLELYRYVNTVKPGLIRVDADEVTYNLHIYLRFTIEKKLIEQSLNVDEVPQVWDDMMEELLGV RPRNAAEGVLQDIHWSHGSIGYFPTYTLGNVIAAMIWRTLWSRSQELLRELRLAELRRWLGENIHKWGATYPPKELVKRV MGEEITAGPLIEYLEWKYLKLPGEVEDYLKP >Mature_510_residues SEQTHLFQDEIVKKIIEKTRVLWALKHALSLMSWDLETYMPPRGVEDRSVAFEELEGLLHRLSRDPELEKLVEKANERLD QLNDYERGVVRVMKRMLRIVKLIPEELARREAKVSSEATVVWREAKKKADFKMFEPYLKEIVEIQREKAERLGYEEHPYD ALLDLYEEGLRTRDMEAIFSELVPATKRILEKVLSGGFYPQNHPLEEAKYDVARARELLKSILNGFEWPWDRGRLDESAH PFTIELGMNDVRITVRYEGYDIKRAVYSLVHEYGHALYELQIDPRIARTPIGHGVSMGVHESQSRFWENIVGRGPWFIPW LKERMDKTIGYTRDYTLLELYRYVNTVKPGLIRVDADEVTYNLHIYLRFTIEKKLIEQSLNVDEVPQVWDDMMEELLGVR PRNAAEGVLQDIHWSHGSIGYFPTYTLGNVIAAMIWRTLWSRSQELLRELRLAELRRWLGENIHKWGATYPPKELVKRVM GEEITAGPLIEYLEWKYLKLPGEVEDYLKP
Specific function: Unknown
COG id: COG2317
COG function: function code E; Zn-dependent carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M32 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001333 [H]
Pfam domain/function: PF02074 Peptidase_M32 [H]
EC number: NA
Molecular weight: Translated: 60241; Mature: 60110
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQTHLFQDEIVKKIIEKTRVLWALKHALSLMSWDLETYMPPRGVEDRSVAFEELEGLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH HRLSRDPELEKLVEKANERLDQLNDYERGVVRVMKRMLRIVKLIPEELARREAKVSSEAT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VVWREAKKKADFKMFEPYLKEIVEIQREKAERLGYEEHPYDALLDLYEEGLRTRDMEAIF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHH SELVPATKRILEKVLSGGFYPQNHPLEEAKYDVARARELLKSILNGFEWPWDRGRLDESA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HPFTIELGMNDVRITVRYEGYDIKRAVYSLVHEYGHALYELQIDPRIARTPIGHGVSMGV CCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHCHHEEEEEECCCHHCCCCCCCCCCCC HESQSRFWENIVGRGPWFIPWLKERMDKTIGYTRDYTLLELYRYVNTVKPGLIRVDADEV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHHHE TYNLHIYLRFTIEKKLIEQSLNVDEVPQVWDDMMEELLGVRPRNAAEGVLQDIHWSHGSI EEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC GYFPTYTLGNVIAAMIWRTLWSRSQELLRELRLAELRRWLGENIHKWGATYPPKELVKRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MGEEITAGPLIEYLEWKYLKLPGEVEDYLKP HCCCCCCHHHHHHHHHHHHCCCCCHHHHCCC >Mature Secondary Structure SEQTHLFQDEIVKKIIEKTRVLWALKHALSLMSWDLETYMPPRGVEDRSVAFEELEGLL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH HRLSRDPELEKLVEKANERLDQLNDYERGVVRVMKRMLRIVKLIPEELARREAKVSSEAT HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VVWREAKKKADFKMFEPYLKEIVEIQREKAERLGYEEHPYDALLDLYEEGLRTRDMEAIF HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHH SELVPATKRILEKVLSGGFYPQNHPLEEAKYDVARARELLKSILNGFEWPWDRGRLDESA HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC HPFTIELGMNDVRITVRYEGYDIKRAVYSLVHEYGHALYELQIDPRIARTPIGHGVSMGV CCEEEEECCCEEEEEEEECCCHHHHHHHHHHHHHCHHEEEEEECCCHHCCCCCCCCCCCC HESQSRFWENIVGRGPWFIPWLKERMDKTIGYTRDYTLLELYRYVNTVKPGLIRVDADEV HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEHHHE TYNLHIYLRFTIEKKLIEQSLNVDEVPQVWDDMMEELLGVRPRNAAEGVLQDIHWSHGSI EEEEEEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC GYFPTYTLGNVIAAMIWRTLWSRSQELLRELRLAELRRWLGENIHKWGATYPPKELVKRV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH MGEEITAGPLIEYLEWKYLKLPGEVEDYLKP HCCCCCCHHHHHHHHHHHHCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8760912; 9384377 [H]