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The map label for this gene is ttdB [C]

Identifier: 124027055

GI number: 124027055

Start: 143022

End: 143621

Strand: Reverse

Name: ttdB [C]

Synonym: Hbut_0158

Alternate gene names: 124027055

Gene position: 143621-143022 (Counterclockwise)

Preceding gene: 124027056

Following gene: 124027050

Centisome position: 8.61

GC content: 55.0

Gene sequence:

>600_bases
ATGACCAACGTGTATAGGCTCCGGACTCCCCTCTCCGAGGAGGATGTACGCAAGCTACGCGTAGGGGACATCGTATACCT
CTCTGGCCTAATATTCACCGCTAGGGACGCTGCGCACCGGAAGATTCTCGAGCTTCTCAACCGCAACGAGAAGCTACCGT
TCGAGCCGAGGGGTCTAGCAGTATACCATGTAGGCCCCGTTGTTAGGAAGAGGAATGGCGAGTGGGAGGTAGTAGCTGCC
GGGCCAACAACAAGCACCAGGATGGAGCCCGTAGAGCACGAATTCATAGCAAAGACTGGGGTTAGAATGGTTATAGGCAA
GGGAGGCATGGGGCCCAGGACCGCTGAGGCGTGCAGAAGGTACGGCGCCGTCTACGCTGTCTTTACAGGTGGTGCTGCTG
TACTAGCGGCCCAGGCAATTAAGCGGGTAGTTGATGTCTACTGGCTGGAGGAGCTAGGCATCCCAGAGGCAGTATGGCTC
TTCGAAGTCGAAGACTTCGGCCCCCTAACAGTAGTCATTGATGCAACCGGCAAGAATCTCTACGACGAGGTAATGGAGAA
CGCTAGGAAGAGGATGGAGGAAATACTTAGCAGGATATAA

Upstream 100 bases:

>100_bases
ACTGCTGGGCCATAAGGAGGGCAACAGGCTACATAACACCCGATGGCAGGTGGGAGATAACATCAAAACACATCTAGATC
CATGCAAAGGGGTGAACCCC

Downstream 100 bases:

>100_bases
GCGGCGATGTCTTCCAGACTAAAAGAGGGGTGTGAAAAAGCAGGATTAGGCTTGCCAACACAACCCTTTTTTGATGTGCC
ACTCACTCTCTGAGCCACTC

Product: L(+)-tartrate dehydratase beta subunit

Products: NA

Alternate protein names: Fumarase [H]

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTNVYRLRTPLSEEDVRKLRVGDIVYLSGLIFTARDAAHRKILELLNRNEKLPFEPRGLAVYHVGPVVRKRNGEWEVVAA
GPTTSTRMEPVEHEFIAKTGVRMVIGKGGMGPRTAEACRRYGAVYAVFTGGAAVLAAQAIKRVVDVYWLEELGIPEAVWL
FEVEDFGPLTVVIDATGKNLYDEVMENARKRMEEILSRI

Sequences:

>Translated_199_residues
MTNVYRLRTPLSEEDVRKLRVGDIVYLSGLIFTARDAAHRKILELLNRNEKLPFEPRGLAVYHVGPVVRKRNGEWEVVAA
GPTTSTRMEPVEHEFIAKTGVRMVIGKGGMGPRTAEACRRYGAVYAVFTGGAAVLAAQAIKRVVDVYWLEELGIPEAVWL
FEVEDFGPLTVVIDATGKNLYDEVMENARKRMEEILSRI
>Mature_198_residues
TNVYRLRTPLSEEDVRKLRVGDIVYLSGLIFTARDAAHRKILELLNRNEKLPFEPRGLAVYHVGPVVRKRNGEWEVVAAG
PTTSTRMEPVEHEFIAKTGVRMVIGKGGMGPRTAEACRRYGAVYAVFTGGAAVLAAQAIKRVVDVYWLEELGIPEAVWLF
EVEDFGPLTVVIDATGKNLYDEVMENARKRMEEILSRI

Specific function: Unknown

COG id: COG1838

COG function: function code C; Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I fumarase family [H]

Homologues:

Organism=Escherichia coli, GI1789443, Length=193, Percent_Identity=45.5958549222798, Blast_Score=192, Evalue=9e-51,
Organism=Escherichia coli, GI1790564, Length=182, Percent_Identity=31.8681318681319, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787897, Length=181, Percent_Identity=29.2817679558011, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004647 [H]

Pfam domain/function: PF05683 Fumerase_C [H]

EC number: =4.2.1.2 [H]

Molecular weight: Translated: 22315; Mature: 22184

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNVYRLRTPLSEEDVRKLRVGDIVYLSGLIFTARDAAHRKILELLNRNEKLPFEPRGLA
CCCCEEECCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
VYHVGPVVRKRNGEWEVVAAGPTTSTRMEPVEHEFIAKTGVRMVIGKGGMGPRTAEACRR
EEECCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
YGAVYAVFTGGAAVLAAQAIKRVVDVYWLEELGIPEAVWLFEVEDFGPLTVVIDATGKNL
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHH
YDEVMENARKRMEEILSRI
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TNVYRLRTPLSEEDVRKLRVGDIVYLSGLIFTARDAAHRKILELLNRNEKLPFEPRGLA
CCCEEECCCCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
VYHVGPVVRKRNGEWEVVAAGPTTSTRMEPVEHEFIAKTGVRMVIGKGGMGPRTAEACRR
EEECCCCEEECCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHH
YGAVYAVFTGGAAVLAAQAIKRVVDVYWLEELGIPEAVWLFEVEDFGPLTVVIDATGKNL
HCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHH
YDEVMENARKRMEEILSRI
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]