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The map label for this gene is 124026936

Identifier: 124026936

GI number: 124026936

Start: 25036

End: 25992

Strand: Direct

Name: 124026936

Synonym: Hbut_0033

Alternate gene names: NA

Gene position: 25036-25992 (Clockwise)

Preceding gene: 124026935

Following gene: 124026937

Centisome position: 1.5

GC content: 49.32

Gene sequence:

>957_bases
ATGCGGCTTGATGAGTTACTCGAGGCGACGGTAAGGCTACTCTACAGCCAAGGCTATAGCGTTGAAAAAATATCATACCC
CGAGAACCCCCAGCGTAGAGGCATAGATGTTGTTGCATCGAAATCTAATGGCGAAGCGTTACTCGTAAAGGTTATTGAGG
ATGCGGCGCAGCTGGGTCCGAAGGATGTGCGTGAGCTTAGGCAGTGTAGCCGCCTACTAGAAGCTAGCGGTATTATTGTT
GCAGAGAGGAGTAATGGTGTTGAAATAGACGATATTGTTGCCATTGAGAAGTCTGGAGTATATGTAGTTAATGTTGATGG
TTTAGGAGCTGCACTCCGGAACGAGGTGTATGTTGTACACAGGCAGGGTAACCTTTACATGAGGGTTAATGGTGAAAAGC
TCAGGGAGGAGAGGCTAAGGAGGGGCTACAGTCTAGGCGATCTTGCATCGTTGCTGAACGTTACCAGGCGTAGCGTCTAC
CTCTATGAGCAGGAGGAGGTTGATGTGTCACTTTCTACAGCGTTGAAGCTCATGGAGATATTTGGTGACGAGATATTCAA
ACCGATACCCGTCATAGCTCGTGAGCGTGGCCGCGAGCATAGCTATCAGGGACAATTGAAGCCTACAATGCAAGCGCCAA
GAACGGCTAGCGGTGAGGCTAGTAGAGCGATACGTGGTATCATAGAGGCTGGTGGTGAAGCTATCGAGACTAAGCGCATA
CCGCCAGACATAGTGGCGAGGATTAACGATGACAAGCTACTGATACTGATAGAACGTAGGCGTGACAAGAAGTTCGAGAA
GAGGGTTTACGAGGCGGTAAAGGTTGCTACAAGGGTTAGTGCCCGCATAATGGCTGTTGTATCCTCTAGCGAGTATGTTA
GTGAAGTTAGGGCTTTCGGCGAGGTGGATGTGTATAGGAACGTTGAGGAGATGCTGCGCGACATAGGTAAGACGTAG

Upstream 100 bases:

>100_bases
TAGGGAGGTGGAGTTTCAGCGGCTATTATCTAGGTTTAAAACCCTTATAATAGTGACACTGCAAATAAATATTATGGAGG
GCGGAGAAGGGTAGCGTGGC

Downstream 100 bases:

>100_bases
GGTTGGCTTGAGTCTAAACTACTGGCTTGAGAGCAATACCTATTACTATCCCTACTCTGCCTAGGCAGCCCATTTGGGGC
TGATGTTTGCCGCTAAAACT

Product: HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRLDELLEATVRLLYSQGYSVEKISYPENPQRRGIDVVASKSNGEALLVKVIEDAAQLGPKDVRELRQCSRLLEASGIIV
AERSNGVEIDDIVAIEKSGVYVVNVDGLGAALRNEVYVVHRQGNLYMRVNGEKLREERLRRGYSLGDLASLLNVTRRSVY
LYEQEEVDVSLSTALKLMEIFGDEIFKPIPVIARERGREHSYQGQLKPTMQAPRTASGEASRAIRGIIEAGGEAIETKRI
PPDIVARINDDKLLILIERRRDKKFEKRVYEAVKVATRVSARIMAVVSSSEYVSEVRAFGEVDVYRNVEEMLRDIGKT

Sequences:

>Translated_318_residues
MRLDELLEATVRLLYSQGYSVEKISYPENPQRRGIDVVASKSNGEALLVKVIEDAAQLGPKDVRELRQCSRLLEASGIIV
AERSNGVEIDDIVAIEKSGVYVVNVDGLGAALRNEVYVVHRQGNLYMRVNGEKLREERLRRGYSLGDLASLLNVTRRSVY
LYEQEEVDVSLSTALKLMEIFGDEIFKPIPVIARERGREHSYQGQLKPTMQAPRTASGEASRAIRGIIEAGGEAIETKRI
PPDIVARINDDKLLILIERRRDKKFEKRVYEAVKVATRVSARIMAVVSSSEYVSEVRAFGEVDVYRNVEEMLRDIGKT
>Mature_318_residues
MRLDELLEATVRLLYSQGYSVEKISYPENPQRRGIDVVASKSNGEALLVKVIEDAAQLGPKDVRELRQCSRLLEASGIIV
AERSNGVEIDDIVAIEKSGVYVVNVDGLGAALRNEVYVVHRQGNLYMRVNGEKLREERLRRGYSLGDLASLLNVTRRSVY
LYEQEEVDVSLSTALKLMEIFGDEIFKPIPVIARERGREHSYQGQLKPTMQAPRTASGEASRAIRGIIEAGGEAIETKRI
PPDIVARINDDKLLILIERRRDKKFEKRVYEAVKVATRVSARIMAVVSSSEYVSEVRAFGEVDVYRNVEEMLRDIGKT

Specific function: Unknown

COG id: COG1395

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR020886
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 35765; Mature: 35765

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDELLEATVRLLYSQGYSVEKISYPENPQRRGIDVVASKSNGEALLVKVIEDAAQLGP
CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCH
KDVRELRQCSRLLEASGIIVAERSNGVEIDDIVAIEKSGVYVVNVDGLGAALRNEVYVVH
HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHEEEEECCCEEEEEECCCCHHHCCCEEEEE
RQGNLYMRVNGEKLREERLRRGYSLGDLASLLNVTRRSVYLYEQEEVDVSLSTALKLMEI
ECCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHH
FGDEIFKPIPVIARERGREHSYQGQLKPTMQAPRTASGEASRAIRGIIEAGGEAIETKRI
HHHHHCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCC
PPDIVARINDDKLLILIERRRDKKFEKRVYEAVKVATRVSARIMAVVSSSEYVSEVRAFG
CHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
EVDVYRNVEEMLRDIGKT
CHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLDELLEATVRLLYSQGYSVEKISYPENPQRRGIDVVASKSNGEALLVKVIEDAAQLGP
CCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHCCH
KDVRELRQCSRLLEASGIIVAERSNGVEIDDIVAIEKSGVYVVNVDGLGAALRNEVYVVH
HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHEEEEECCCEEEEEECCCCHHHCCCEEEEE
RQGNLYMRVNGEKLREERLRRGYSLGDLASLLNVTRRSVYLYEQEEVDVSLSTALKLMEI
ECCCEEEEECHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCEEHHHHHHHHHH
FGDEIFKPIPVIARERGREHSYQGQLKPTMQAPRTASGEASRAIRGIIEAGGEAIETKRI
HHHHHCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCHHHCCCC
PPDIVARINDDKLLILIERRRDKKFEKRVYEAVKVATRVSARIMAVVSSSEYVSEVRAFG
CHHHHEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
EVDVYRNVEEMLRDIGKT
CHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]