| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967127
Identifier: 123967127
GI number: 123967127
Start: 1686579
End: 1687661
Strand: Direct
Name: 123967127
Synonym: P9515_18941
Alternate gene names: NA
Gene position: 1686579-1687661 (Clockwise)
Preceding gene: 123967125
Following gene: 123967129
Centisome position: 98.97
GC content: 26.41
Gene sequence:
>1083_bases ATGAAAGTATTAAAAAAACATTTTAAAAAATCTCATATATTAATTATCGGTTCAGGAATTATTGGTAAATTTAACGCATT GGAGCTATCTGAACAAGGTTTTCAAATCACTATTGTAGATCCAAAAAAAGGTACAAATAGTAGTAGCGCTGCGTTGGGTC TCTTAATGAGTCACATGTATCAAAAAAGTAAAGGCAGAAGTTGGGAACTGAGAAAAAAAAGTAATGAATTATGGCCAAAA TGGATAAAATTTCTTAGACAATATGACGAAAATTTAAAAATTGAAAAACCATTAATTCAACTAACAACAGACAAAACAAA ATTTGAAAAACTAAATCAGTTTATATCTCATCATCCCAATAGAAATTTAAAAGTTTTAGACAGAGATTCTACGATTATAA AAAGTATTAACAAAATATTTAATATTGAAAACTTAAGAGGAATCATCTCTTTTCAAGATGGCAGAATTGATCCTATTTCA TTATTAAAAACATTAGATATTTATATAAAAAGTAAAAAAATAAAAACTATAGAAGAAGAAATTATCAAAATAAAAAAAAT TAATAATCAATGGATTTCTGAGTGCAAAAATACATTAGAAATAAAATCTGATGCAATTATTTTATGTAACTCTCTTGAAG CAATAAAATTGATTGATTCAGATCTTCATAAAATCAGATTAAAACCAGTATTAGGTCAAGCGATAGAAATTGCAACTAAT GATAAAGAAATTGATTTATTCTCTCTTCCTAAGCATTTCAGTATTAATAGCAAAAATTTTATTAGAATTAATAAAAACAA ATTGATTATTGGGTCTACGGACGAAAATAAAATAACACCTAGAGATAACGCATTTGAGGAACTTACCAATTTCTTAGAAA ATAAGCCAAGTTGGCTGAACCAAAATACAATTACAAATAAATGGTTTGGTATTAGATCACGTCCTGAAGGAGAACCTTCT CCTATACTAAGAAGTTTAGAAAAAGGTTTGGTTTTATGTACTGGTTTTTATAAAAATGGAATATTACTTGCTCCCGCTTG TTCTTCTTGGATTTCAGATGAAATTAAAAAACACGTTATTTAA
Upstream 100 bases:
>100_bases CTAGTCCGGAACGATCAGGACAAACTGTTCTGAATATAATAGATGGTCTTTCCAAAAATCTAAGTATTTAATTTTTTAGT TAATTTCATATAATATATCA
Downstream 100 bases:
>100_bases TCTTTTGTTTCTGTAAAGTCAGCATCAATAACATCATCATCAGGACCTTTATCATCAGAAGCATTTGCGTTTGGACCTCC TGGGGCAGGTGGTTGATTAC
Product: NAD binding site:D-amino acid oxidase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase; Glycine/D-Amino Acid Oxidases
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI
Sequences:
>Translated_360_residues MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI >Mature_360_residues MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41425; Mature: 41425
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMY CCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH QKSKGRSWELRKKSNELWPKWIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPN HHCCCCCEEHHHCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCHHHHHHHHHHHHHCCC RNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPISLLKTLDIYIKSKKIKTIEEE CCCEEEECCHHHHHHHHHHHCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH IIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN HHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHEEECHHHCCEEEEECC DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLN CCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC QNTITNKWFGIRSRPEGEPSPILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI CCCCCCCEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCC >Mature Secondary Structure MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMY CCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH QKSKGRSWELRKKSNELWPKWIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPN HHCCCCCEEHHHCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCHHHHHHHHHHHHHCCC RNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPISLLKTLDIYIKSKKIKTIEEE CCCEEEECCHHHHHHHHHHHCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH IIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN HHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHEEECHHHCCEEEEECC DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLN CCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC QNTITNKWFGIRSRPEGEPSPILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI CCCCCCCEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA