Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123967127

Identifier: 123967127

GI number: 123967127

Start: 1686579

End: 1687661

Strand: Direct

Name: 123967127

Synonym: P9515_18941

Alternate gene names: NA

Gene position: 1686579-1687661 (Clockwise)

Preceding gene: 123967125

Following gene: 123967129

Centisome position: 98.97

GC content: 26.41

Gene sequence:

>1083_bases
ATGAAAGTATTAAAAAAACATTTTAAAAAATCTCATATATTAATTATCGGTTCAGGAATTATTGGTAAATTTAACGCATT
GGAGCTATCTGAACAAGGTTTTCAAATCACTATTGTAGATCCAAAAAAAGGTACAAATAGTAGTAGCGCTGCGTTGGGTC
TCTTAATGAGTCACATGTATCAAAAAAGTAAAGGCAGAAGTTGGGAACTGAGAAAAAAAAGTAATGAATTATGGCCAAAA
TGGATAAAATTTCTTAGACAATATGACGAAAATTTAAAAATTGAAAAACCATTAATTCAACTAACAACAGACAAAACAAA
ATTTGAAAAACTAAATCAGTTTATATCTCATCATCCCAATAGAAATTTAAAAGTTTTAGACAGAGATTCTACGATTATAA
AAAGTATTAACAAAATATTTAATATTGAAAACTTAAGAGGAATCATCTCTTTTCAAGATGGCAGAATTGATCCTATTTCA
TTATTAAAAACATTAGATATTTATATAAAAAGTAAAAAAATAAAAACTATAGAAGAAGAAATTATCAAAATAAAAAAAAT
TAATAATCAATGGATTTCTGAGTGCAAAAATACATTAGAAATAAAATCTGATGCAATTATTTTATGTAACTCTCTTGAAG
CAATAAAATTGATTGATTCAGATCTTCATAAAATCAGATTAAAACCAGTATTAGGTCAAGCGATAGAAATTGCAACTAAT
GATAAAGAAATTGATTTATTCTCTCTTCCTAAGCATTTCAGTATTAATAGCAAAAATTTTATTAGAATTAATAAAAACAA
ATTGATTATTGGGTCTACGGACGAAAATAAAATAACACCTAGAGATAACGCATTTGAGGAACTTACCAATTTCTTAGAAA
ATAAGCCAAGTTGGCTGAACCAAAATACAATTACAAATAAATGGTTTGGTATTAGATCACGTCCTGAAGGAGAACCTTCT
CCTATACTAAGAAGTTTAGAAAAAGGTTTGGTTTTATGTACTGGTTTTTATAAAAATGGAATATTACTTGCTCCCGCTTG
TTCTTCTTGGATTTCAGATGAAATTAAAAAACACGTTATTTAA

Upstream 100 bases:

>100_bases
CTAGTCCGGAACGATCAGGACAAACTGTTCTGAATATAATAGATGGTCTTTCCAAAAATCTAAGTATTTAATTTTTTAGT
TAATTTCATATAATATATCA

Downstream 100 bases:

>100_bases
TCTTTTGTTTCTGTAAAGTCAGCATCAATAACATCATCATCAGGACCTTTATCATCAGAAGCATTTGCGTTTGGACCTCC
TGGGGCAGGTGGTTGATTAC

Product: NAD binding site:D-amino acid oxidase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; Glycine/D-Amino Acid Oxidases

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK
WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS
LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN
DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS
PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI

Sequences:

>Translated_360_residues
MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK
WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS
LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN
DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS
PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI
>Mature_360_residues
MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMYQKSKGRSWELRKKSNELWPK
WIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPNRNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPIS
LLKTLDIYIKSKKIKTIEEEIIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN
DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLNQNTITNKWFGIRSRPEGEPS
PILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41425; Mature: 41425

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMY
CCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
QKSKGRSWELRKKSNELWPKWIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPN
HHCCCCCEEHHHCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCHHHHHHHHHHHHHCCC
RNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPISLLKTLDIYIKSKKIKTIEEE
CCCEEEECCHHHHHHHHHHHCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH
IIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN
HHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHEEECHHHCCEEEEECC
DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLN
CCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
QNTITNKWFGIRSRPEGEPSPILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI
CCCCCCCEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVLKKHFKKSHILIIGSGIIGKFNALELSEQGFQITIVDPKKGTNSSSAALGLLMSHMY
CCHHHHHCCCCEEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHH
QKSKGRSWELRKKSNELWPKWIKFLRQYDENLKIEKPLIQLTTDKTKFEKLNQFISHHPN
HHCCCCCEEHHHCCCCCCHHHHHHHHHHCCCCEECCCEEEEECCHHHHHHHHHHHHHCCC
RNLKVLDRDSTIIKSINKIFNIENLRGIISFQDGRIDPISLLKTLDIYIKSKKIKTIEEE
CCCEEEECCHHHHHHHHHHHCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHH
IIKIKKINNQWISECKNTLEIKSDAIILCNSLEAIKLIDSDLHKIRLKPVLGQAIEIATN
HHHHHHHCHHHHHHHHHHHEECCCEEEEECCCHHHHHHHHHHHHEEECHHHCCEEEEECC
DKEIDLFSLPKHFSINSKNFIRINKNKLIIGSTDENKITPRDNAFEELTNFLENKPSWLN
CCCEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCC
QNTITNKWFGIRSRPEGEPSPILRSLEKGLVLCTGFYKNGILLAPACSSWISDEIKKHVI
CCCCCCCEECCCCCCCCCCHHHHHHHHCCEEEEEEECCCCEEECCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA