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The map label for this gene is farR [C]

Identifier: 123967059

GI number: 123967059

Start: 1608775

End: 1609761

Strand: Direct

Name: farR [C]

Synonym: P9515_18261

Alternate gene names: 123967059

Gene position: 1608775-1609761 (Clockwise)

Preceding gene: 123967058

Following gene: 123967060

Centisome position: 94.4

GC content: 33.64

Gene sequence:

>987_bases
GTGAGATTCCATATTCAACAAGAAATTGATATTCCGGCTTCGATACAGTTATACAATCAGATTTGCTTTGCAATTGCAGC
CAGATATTATCCTCCTGGACACCGTTTGCCAAGTACTAGACAATTAGCGATGCAAACAGGGCTTCATCGTAATACTATCA
GTAAAGTTTACAGACAACTCGAGATGGATGGTGTTGTTGAAGCTATAGCAGGTTCAGGTATTTATGTAAGAGACAACCTT
AAAAAAAGTGATTTTAAAAAATCTTTTAATTCAAAAAACAACTCTAATCGAGCTCCTGATCAAGAAGCAAAAAAAGCAAT
TGATAAATTAATAAAACTTGGGTGCACTCTGCAAGAAACACGAAATTTTTTAACTTACGAAATTGATTGGCGTATAAAAT
GTGGGTCAAGAATATTAGTAAGTACTCCAAGGGAAGATATAGGTGCCTCCATGTTAATTGCAGAAGACCTCTCTCCAAAA
ATCAATGTCCCAGTTGAAGTTATTCCCATGGAGGAATTAGAAAAAGTTCTTTGCAACTCAAATAATGGAACAATTGTTAC
AAGTAGATATTTTTTGCAGCCTTTAGAAAAACTAGCAAAAAAATATAGAGTAAGAGCCATAGCAGTTGATTTGAGCGACT
TTCAGAAAGAATTAAAGATAATAAAAGAATTACAACTTGGTAGTTGTGTTGGCATTGTGAGCATTAGTCCTGGACTATTA
AGAGCAGCAGAAATTATCATACACAGTATGAGAGGAAGTGACATAGTACTTATGACAGCTATTTCGGATAACAGCAGTAA
ATTACTTACTCTTTTAAAATCTTCAAATTATGTAGTCTGCGACGGACCTAGTTTATCGGTTGTTGAAAATGCTCTTATCA
AAAACCGTTCCCAACTAATGAGAATGCCACAAATTATATGTGCAAAAAATTACTTAAGTATCGAAACAATAAATCAATTA
AAAACAGAAATAGGAGTGATTAATTAA

Upstream 100 bases:

>100_bases
AAAGAAAATAATTAATCTACAAGAAATTCACCCAAAGATTATGACAGATGTTAAAGTGCCACCTAAGGTAATTTAAGAAC
TAAATTAGGTATTTTCTAAA

Downstream 100 bases:

>100_bases
CTATGTTGAGAAATTTTAGATCGGACATTGAAATAATAAGAGAAAGAGATCCAGCAGCAAGAGGTATTTTAGAGATTTTC
CTTTGCTATCCTGGTTTCCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator GntR Family Protein; GntR Family Transcriptional Regulatory Protein; GntR Family Transcriptional Repressor

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MRFHIQQEIDIPASIQLYNQICFAIAARYYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
KKSDFKKSFNSKNNSNRAPDQEAKKAIDKLIKLGCTLQETRNFLTYEIDWRIKCGSRILVSTPREDIGASMLIAEDLSPK
INVPVEVIPMEELEKVLCNSNNGTIVTSRYFLQPLEKLAKKYRVRAIAVDLSDFQKELKIIKELQLGSCVGIVSISPGLL
RAAEIIIHSMRGSDIVLMTAISDNSSKLLTLLKSSNYVVCDGPSLSVVENALIKNRSQLMRMPQIICAKNYLSIETINQL
KTEIGVIN

Sequences:

>Translated_328_residues
MRFHIQQEIDIPASIQLYNQICFAIAARYYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
KKSDFKKSFNSKNNSNRAPDQEAKKAIDKLIKLGCTLQETRNFLTYEIDWRIKCGSRILVSTPREDIGASMLIAEDLSPK
INVPVEVIPMEELEKVLCNSNNGTIVTSRYFLQPLEKLAKKYRVRAIAVDLSDFQKELKIIKELQLGSCVGIVSISPGLL
RAAEIIIHSMRGSDIVLMTAISDNSSKLLTLLKSSNYVVCDGPSLSVVENALIKNRSQLMRMPQIICAKNYLSIETINQL
KTEIGVIN
>Mature_328_residues
MRFHIQQEIDIPASIQLYNQICFAIAARYYPPGHRLPSTRQLAMQTGLHRNTISKVYRQLEMDGVVEAIAGSGIYVRDNL
KKSDFKKSFNSKNNSNRAPDQEAKKAIDKLIKLGCTLQETRNFLTYEIDWRIKCGSRILVSTPREDIGASMLIAEDLSPK
INVPVEVIPMEELEKVLCNSNNGTIVTSRYFLQPLEKLAKKYRVRAIAVDLSDFQKELKIIKELQLGSCVGIVSISPGLL
RAAEIIIHSMRGSDIVLMTAISDNSSKLLTLLKSSNYVVCDGPSLSVVENALIKNRSQLMRMPQIICAKNYLSIETINQL
KTEIGVIN

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36799; Mature: 36799

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFHIQQEIDIPASIQLYNQICFAIAARYYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EMDGVVEAIAGSGIYVRDNLKKSDFKKSFNSKNNSNRAPDQEAKKAIDKLIKLGCTLQET
HHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC
RNFLTYEIDWRIKCGSRILVSTPREDIGASMLIAEDLSPKINVPVEVIPMEELEKVLCNS
CCEEEEEEEEEEECCCEEEEECCCHHHCCEEEEECCCCCCCCCCEEEECHHHHHHHHHCC
NNGTIVTSRYFLQPLEKLAKKYRVRAIAVDLSDFQKELKIIKELQLGSCVGIVSISPGLL
CCCEEEEHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
RAAEIIIHSMRGSDIVLMTAISDNSSKLLTLLKSSNYVVCDGPSLSVVENALIKNRSQLM
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHEEECCCEEEECCCCHHHHHHHHHHCHHHHH
RMPQIICAKNYLSIETINQLKTEIGVIN
HHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRFHIQQEIDIPASIQLYNQICFAIAARYYPPGHRLPSTRQLAMQTGLHRNTISKVYRQL
CCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHH
EMDGVVEAIAGSGIYVRDNLKKSDFKKSFNSKNNSNRAPDQEAKKAIDKLIKLGCTLQET
HHHHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHC
RNFLTYEIDWRIKCGSRILVSTPREDIGASMLIAEDLSPKINVPVEVIPMEELEKVLCNS
CCEEEEEEEEEEECCCEEEEECCCHHHCCEEEEECCCCCCCCCCEEEECHHHHHHHHHCC
NNGTIVTSRYFLQPLEKLAKKYRVRAIAVDLSDFQKELKIIKELQLGSCVGIVSISPGLL
CCCEEEEHHHHHHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
RAAEIIIHSMRGSDIVLMTAISDNSSKLLTLLKSSNYVVCDGPSLSVVENALIKNRSQLM
HHHHHHHHHCCCCCEEEEEEECCCCHHHHHEEECCCEEEECCCCHHHHHHHHHHCHHHHH
RMPQIICAKNYLSIETINQLKTEIGVIN
HHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA