| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is mrp [H]
Identifier: 123967001
GI number: 123967001
Start: 1555904
End: 1556971
Strand: Reverse
Name: mrp [H]
Synonym: P9515_17681
Alternate gene names: 123967001
Gene position: 1556971-1555904 (Counterclockwise)
Preceding gene: 123967003
Following gene: 123967000
Centisome position: 91.36
GC content: 33.33
Gene sequence:
>1068_bases ATGACTACAGTCGAAGATGCGAATAATGCTTTATCAAAGATTCTGGATTCTGGATCGAAGAAAAATCTCATTGAATTAGC TTGGATTAAAAACGTTAGAGTAGTTATACCTAGAATAATAATCACTCTATCATTACCCTCCTTCGCAAATTCACAGAGAG ATAGAATAGTAAAAGAAGTAAGAAATAATCTTCTTCAATTCGAGGATATTAATGACGTACAAATAGAAATAGATAACAAC CTTTCTCAATCAAATTCCAAAAGTGAAAGTAATGTTCCTGAGTTAAAGAACATAAAAGGAATAAAACATATTATTGCTAT TAGTAGCGGTAAAGGAGGTGTTGGGAAAAGTACGATAGCAGTTAATATTGCATGCTCATTAGCTAAATTAGGACTTAAAA CAGGTTTGTTAGATGCTGATATTTATGGGCCTAATACTCCTGCAATGCTTGGAGTTACTGAAGAAAATCCAACAGTGACA GATGGTAGCGGTAATGATTCAAGATTAATACCCATTAATAAGTTTGGAATTTCATTAGTCTCAATGGGGTTTTTGATAGA AGAAGGACAACCAGTGATATGGCGAGGACCAATGTTAAATAGCATAATAAAACAATTCCTTTATCAAGTTGAATGGAGTA ATCTTGACTTTTTGGTGATTGATTTACCTCCAGGGACAGGAGATGCTCAGATATCTCTATCTCAGTCTGTCCCTATTTCA GGCGCAATTGTTGTGACAACGCCTCAACAAGTATCTTTGCAAGATGCAAGAAGAGGTTTAGCAATGTTTAAGCAACTTGG CGTCCCATTATTGGGTGTTGTAGAAAATATGTCTGTATTTATTCCTCCTGATATGCCCAATAAAAAATATGAAATTTTTG GTAAAGGAGGTGGAAAAATCTTAGCTGGAGAAAATAATTTGCCATTACTTGCTCAAATTCCTATTGAAATAACACTTGTT AATGAGAGTAATAAAGGGATTCCAATTTCAATCAGTGAACCAGATAAAGAAAGTTCTATTAGATTTAAAGAGTTGGCTCT ATTAATTAAAAAAACATTTATTAATTAG
Upstream 100 bases:
>100_bases TTTCCTTTAAGGGGGAGTAATTTCTTATTATTTGATAGTTCGACATAGTTCTTAATCTTTTAACAAGTCGACTAACCTAT AAAATCATTTAAAAATTTTG
Downstream 100 bases:
>100_bases CAATAAATGATCAACGAAATTTCTTTGCTACAGAATAAGAGATTTTTTCAAAAGAAAGATAAATTTGATCGAAAAAATTT TTTTTCACCTTTAGTTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MTTVEDANNALSKILDSGSKKNLIELAWIKNVRVVIPRIIITLSLPSFANSQRDRIVKEVRNNLLQFEDINDVQIEIDNN LSQSNSKSESNVPELKNIKGIKHIIAISSGKGGVGKSTIAVNIACSLAKLGLKTGLLDADIYGPNTPAMLGVTEENPTVT DGSGNDSRLIPINKFGISLVSMGFLIEEGQPVIWRGPMLNSIIKQFLYQVEWSNLDFLVIDLPPGTGDAQISLSQSVPIS GAIVVTTPQQVSLQDARRGLAMFKQLGVPLLGVVENMSVFIPPDMPNKKYEIFGKGGGKILAGENNLPLLAQIPIEITLV NESNKGIPISISEPDKESSIRFKELALLIKKTFIN
Sequences:
>Translated_355_residues MTTVEDANNALSKILDSGSKKNLIELAWIKNVRVVIPRIIITLSLPSFANSQRDRIVKEVRNNLLQFEDINDVQIEIDNN LSQSNSKSESNVPELKNIKGIKHIIAISSGKGGVGKSTIAVNIACSLAKLGLKTGLLDADIYGPNTPAMLGVTEENPTVT DGSGNDSRLIPINKFGISLVSMGFLIEEGQPVIWRGPMLNSIIKQFLYQVEWSNLDFLVIDLPPGTGDAQISLSQSVPIS GAIVVTTPQQVSLQDARRGLAMFKQLGVPLLGVVENMSVFIPPDMPNKKYEIFGKGGGKILAGENNLPLLAQIPIEITLV NESNKGIPISISEPDKESSIRFKELALLIKKTFIN >Mature_354_residues TTVEDANNALSKILDSGSKKNLIELAWIKNVRVVIPRIIITLSLPSFANSQRDRIVKEVRNNLLQFEDINDVQIEIDNNL SQSNSKSESNVPELKNIKGIKHIIAISSGKGGVGKSTIAVNIACSLAKLGLKTGLLDADIYGPNTPAMLGVTEENPTVTD GSGNDSRLIPINKFGISLVSMGFLIEEGQPVIWRGPMLNSIIKQFLYQVEWSNLDFLVIDLPPGTGDAQISLSQSVPISG AIVVTTPQQVSLQDARRGLAMFKQLGVPLLGVVENMSVFIPPDMPNKKYEIFGKGGGKILAGENNLPLLAQIPIEITLVN ESNKGIPISISEPDKESSIRFKELALLIKKTFIN
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=259, Percent_Identity=44.015444015444, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI6912540, Length=238, Percent_Identity=40.7563025210084, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI118572611, Length=282, Percent_Identity=36.1702127659575, Blast_Score=173, Evalue=3e-43, Organism=Escherichia coli, GI87082045, Length=327, Percent_Identity=40.0611620795107, Blast_Score=247, Evalue=1e-66, Organism=Caenorhabditis elegans, GI25143050, Length=277, Percent_Identity=39.3501805054152, Blast_Score=171, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6322188, Length=265, Percent_Identity=40, Blast_Score=177, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321347, Length=250, Percent_Identity=40, Blast_Score=155, Evalue=9e-39, Organism=Drosophila melanogaster, GI221511043, Length=256, Percent_Identity=42.578125, Blast_Score=200, Evalue=1e-51, Organism=Drosophila melanogaster, GI24667611, Length=229, Percent_Identity=40.174672489083, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI19921440, Length=243, Percent_Identity=37.037037037037, Blast_Score=129, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR015223 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF09140 MipZ; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 38487; Mature: 38356
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS01215 MRP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVEDANNALSKILDSGSKKNLIELAWIKNVRVVIPRIIITLSLPSFANSQRDRIVKEV CCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHEEEEEEEEEECCCCCCCHHHHHHHHH RNNLLQFEDINDVQIEIDNNLSQSNSKSESNVPELKNIKGIKHIIAISSGKGGVGKSTIA HHCCEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCEEE VNIACSLAKLGLKTGLLDADIYGPNTPAMLGVTEENPTVTDGSGNDSRLIPINKFGISLV EEEEHHHHHHHHHHCCEECCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEHHHCHHHH SMGFLIEEGQPVIWRGPMLNSIIKQFLYQVEWSNLDFLVIDLPPGTGDAQISLSQSVPIS HHEEEEECCCCEEEECHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEEECCCCCC GAIVVTTPQQVSLQDARRGLAMFKQLGVPLLGVVENMSVFIPPDMPNKKYEIFGKGGGKI CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHCCCEEEECCCCCCCCEEEEECCCCEE LAGENNLPLLAQIPIEITLVNESNKGIPISISEPDKESSIRFKELALLIKKTFIN EECCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TTVEDANNALSKILDSGSKKNLIELAWIKNVRVVIPRIIITLSLPSFANSQRDRIVKEV CCCCHHHHHHHHHHHCCCCCCEEEEEECCCCHHEEEEEEEEEECCCCCCCHHHHHHHHH RNNLLQFEDINDVQIEIDNNLSQSNSKSESNVPELKNIKGIKHIIAISSGKGGVGKSTIA HHCCEEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHCCCEEEEEEEECCCCCCCCCEEE VNIACSLAKLGLKTGLLDADIYGPNTPAMLGVTEENPTVTDGSGNDSRLIPINKFGISLV EEEEHHHHHHHHHHCCEECCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEHHHCHHHH SMGFLIEEGQPVIWRGPMLNSIIKQFLYQVEWSNLDFLVIDLPPGTGDAQISLSQSVPIS HHEEEEECCCCEEEECHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCEEEEECCCCCC GAIVVTTPQQVSLQDARRGLAMFKQLGVPLLGVVENMSVFIPPDMPNKKYEIFGKGGGKI CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEHHCCCEEEECCCCCCCCEEEEECCCCEE LAGENNLPLLAQIPIEITLVNESNKGIPISISEPDKESSIRFKELALLIKKTFIN EECCCCCCEEEECCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]