| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123967003
Identifier: 123967003
GI number: 123967003
Start: 1558189
End: 1558800
Strand: Reverse
Name: 123967003
Synonym: P9515_17701
Alternate gene names: NA
Gene position: 1558800-1558189 (Counterclockwise)
Preceding gene: 123967005
Following gene: 123967001
Centisome position: 91.47
GC content: 30.56
Gene sequence:
>612_bases ATGATGTTGAACTATATAAACAATTTGAGCCTAATAATAAGAAATTTATTAATGACTTATTCTCTTAATTCAACATTATT ACTTACGATTCTTCTTGGGATAGGTTTATTTTTTTTTCTAAGAGCCTCTAGTAAAGATAGAACAACAGTAGTTGAAATAA CTTCATCTCAAAAACCATTAGAAGTGTTAAAAGTAATGTATGAATGGCTTAATTTAAGAGGCTGGAAACAGTCTGGTGGA AATTTTGAACAAAGAATTTTAATCTTTAAGGGACAGGTTGTATCTAGTAAATTATTGGCAATCTTTTTAAGTTTGCTTGG TGGCTTTGGATCTTGTGCTCTAGGGTTAGTAATTATTCAAATCTTCCCAACTTTAGGATGGTGGCCTATCCTATTAGGTT TTATTGGAGGCCCTTTATCAGGAATGATCTACTTTAAGAAGTCAGCTAGGGAAGAAAAATTTGAATTAAGATTAATAAGT AATGATAACAATGAAGATATGACCTCAATGAGATTAAGAGCTCATAGAGATGAATTAATATCTCTTGAAAATGAACTGAG TGATAGGCTCAAATTAAAAAGTGATGGTTCTTTGTTTAAAACACCTATCTAG
Upstream 100 bases:
>100_bases TACCTTAATTATTACTTTACATTATTTTTATAAATTTGTGATTCAATTATTTATCTGGAATTTAATTCATGTTTAATCGT AGTAAATCATAATTTATATT
Downstream 100 bases:
>100_bases TAAAAATTACTTCAGAATTTTGAGAATATTTAATCAAAAATATTATTTTCTAAACAAAATTCTTCTAAAACCTTATCATT TTGCCAATCTTGAGGCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MMLNYINNLSLIIRNLLMTYSLNSTLLLTILLGIGLFFFLRASSKDRTTVVEITSSQKPLEVLKVMYEWLNLRGWKQSGG NFEQRILIFKGQVVSSKLLAIFLSLLGGFGSCALGLVIIQIFPTLGWWPILLGFIGGPLSGMIYFKKSAREEKFELRLIS NDNNEDMTSMRLRAHRDELISLENELSDRLKLKSDGSLFKTPI
Sequences:
>Translated_203_residues MMLNYINNLSLIIRNLLMTYSLNSTLLLTILLGIGLFFFLRASSKDRTTVVEITSSQKPLEVLKVMYEWLNLRGWKQSGG NFEQRILIFKGQVVSSKLLAIFLSLLGGFGSCALGLVIIQIFPTLGWWPILLGFIGGPLSGMIYFKKSAREEKFELRLIS NDNNEDMTSMRLRAHRDELISLENELSDRLKLKSDGSLFKTPI >Mature_203_residues MMLNYINNLSLIIRNLLMTYSLNSTLLLTILLGIGLFFFLRASSKDRTTVVEITSSQKPLEVLKVMYEWLNLRGWKQSGG NFEQRILIFKGQVVSSKLLAIFLSLLGGFGSCALGLVIIQIFPTLGWWPILLGFIGGPLSGMIYFKKSAREEKFELRLIS NDNNEDMTSMRLRAHRDELISLENELSDRLKLKSDGSLFKTPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23040; Mature: 23040
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLNYINNLSLIIRNLLMTYSLNSTLLLTILLGIGLFFFLRASSKDRTTVVEITSSQKPL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH EVLKVMYEWLNLRGWKQSGGNFEQRILIFKGQVVSSKLLAIFLSLLGGFGSCALGLVIIQ HHHHHHHHHHCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IFPTLGWWPILLGFIGGPLSGMIYFKKSAREEKFELRLISNDNNEDMTSMRLRAHRDELI HHHCCCHHHHHHHHHCCCHHHEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH SLENELSDRLKLKSDGSLFKTPI HHHHHHHHHEEECCCCCEECCCC >Mature Secondary Structure MMLNYINNLSLIIRNLLMTYSLNSTLLLTILLGIGLFFFLRASSKDRTTVVEITSSQKPL CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCH EVLKVMYEWLNLRGWKQSGGNFEQRILIFKGQVVSSKLLAIFLSLLGGFGSCALGLVIIQ HHHHHHHHHHCCCCCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHH IFPTLGWWPILLGFIGGPLSGMIYFKKSAREEKFELRLISNDNNEDMTSMRLRAHRDELI HHHCCCHHHHHHHHHCCCHHHEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH SLENELSDRLKLKSDGSLFKTPI HHHHHHHHHEEECCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA