| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is thiF [H]
Identifier: 123966989
GI number: 123966989
Start: 1541555
End: 1542703
Strand: Direct
Name: thiF [H]
Synonym: P9515_17561
Alternate gene names: 123966989
Gene position: 1541555-1542703 (Clockwise)
Preceding gene: 123966987
Following gene: 123966991
Centisome position: 90.46
GC content: 28.46
Gene sequence:
>1149_bases ATGAAAATATCAATTGATCACAAATCTGATTCCTTAACTTTAGATGAAGAAGATAGATACAAGAGACATTTAACACTCAA TGAAATAGGATTAAAGGGACAATTAAAACTTAAACGCAGTTCAGTAGTTTGTATTGGCGCAGGAGGTTTAGGCTCTTCTG TATTAATTTATCTTGCCGCTGCAGGAATTGGAACAATAGGAATAGTTGATAATGATCAAGTTGAGAAGTCGAATCTACAA AGACAAATAATTCATGAAACAAATACAGTTGGGGATTTAAAAATTGATTCTGCTCAAGAAAGAATTAGAAGATTGAATCC TAATATTGAAGTAATAACTTTTGCTGAACGAATTAACTCAAATAATATTCTCGATATTATTAATCAATTTGATATTGTTT GTGATTGTTCAGATAACTTTGGTACTCGTTATTTAATAAACGATGCTTGCTTAATACTTGATAAACCTTTAGTTTTTGGA AGCGTTCAAGGATTTGAAGGCCAAATCAGTGTTTTTAATCTAAAAAAAAATAGTCCCAATTTAAGAGACTTACTCCCGGA ATCGCCTTTAAAAAATAATATTCCTAGCTGCGAAGAATTTGGCGTTATAGGAGTTTCAACTGGTCTTATAGGAGTTTTAC AAGCAAATGAAGCAATAAAGATTATTCTTAAAAAAGGGCAAATTCTTGATGGGAAGATTTTGATTTTCAACCTTCTCAAT ATGAATATAAAAACATTGACTTTAAAAGCTGATAAATTTACAAATACGATTAATGACCTTTCTGAGTTTGAAGATTTTTA TAAAGACATTGAATGTCAAGATAATATAAAAATTAATAAAATAGATTCCACGACATTTGAAACACTATACAGATCAAATT ATAATAATCTACTAATAATAGATGTTAGAGAAAAAGAGGAATTTAATAAATACTCTATTAAAGGAGCGATATCTATACCA CTTAATAATCTAGACCAAAAACCACACCTAGAATTTATCAAACAAGAAAGTTTGGATAAAGAAGTATTTACATTATGTCA AGCAGGAAAACGATCTGAAAAAGCTTCAAAGATTTTGATGAAATTTAAAATCTCATCAAAATCAATTGAAGGAGGAATTG CAAATATTAAACAACTAATTTTTCATTAA
Upstream 100 bases:
>100_bases AACAAAAAACATTAAAAAACCACATCAACAGAAAAAAATAAAAAGTCTAAAATAATTTTTTAAATTATTATATTTTCATA GATTATTTATAAAAACAAGA
Downstream 100 bases:
>100_bases CATACTGAATAAACTTTAATAATCTACCCCTCTTTTTAAATCAACTCCAAGATTCGCATAATGCTTGTGACAAACCATTT CAGAATATACATCAGCTAAT
Product: molybdopterin biosynthesis protein
Products: NA
Alternate protein names: Sulfur carrier protein CysO adenylyltransferase; Sulfur carrier protein CysO sulfurtransferase [H]
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MKISIDHKSDSLTLDEEDRYKRHLTLNEIGLKGQLKLKRSSVVCIGAGGLGSSVLIYLAAAGIGTIGIVDNDQVEKSNLQ RQIIHETNTVGDLKIDSAQERIRRLNPNIEVITFAERINSNNILDIINQFDIVCDCSDNFGTRYLINDACLILDKPLVFG SVQGFEGQISVFNLKKNSPNLRDLLPESPLKNNIPSCEEFGVIGVSTGLIGVLQANEAIKIILKKGQILDGKILIFNLLN MNIKTLTLKADKFTNTINDLSEFEDFYKDIECQDNIKINKIDSTTFETLYRSNYNNLLIIDVREKEEFNKYSIKGAISIP LNNLDQKPHLEFIKQESLDKEVFTLCQAGKRSEKASKILMKFKISSKSIEGGIANIKQLIFH
Sequences:
>Translated_382_residues MKISIDHKSDSLTLDEEDRYKRHLTLNEIGLKGQLKLKRSSVVCIGAGGLGSSVLIYLAAAGIGTIGIVDNDQVEKSNLQ RQIIHETNTVGDLKIDSAQERIRRLNPNIEVITFAERINSNNILDIINQFDIVCDCSDNFGTRYLINDACLILDKPLVFG SVQGFEGQISVFNLKKNSPNLRDLLPESPLKNNIPSCEEFGVIGVSTGLIGVLQANEAIKIILKKGQILDGKILIFNLLN MNIKTLTLKADKFTNTINDLSEFEDFYKDIECQDNIKINKIDSTTFETLYRSNYNNLLIIDVREKEEFNKYSIKGAISIP LNNLDQKPHLEFIKQESLDKEVFTLCQAGKRSEKASKILMKFKISSKSIEGGIANIKQLIFH >Mature_382_residues MKISIDHKSDSLTLDEEDRYKRHLTLNEIGLKGQLKLKRSSVVCIGAGGLGSSVLIYLAAAGIGTIGIVDNDQVEKSNLQ RQIIHETNTVGDLKIDSAQERIRRLNPNIEVITFAERINSNNILDIINQFDIVCDCSDNFGTRYLINDACLILDKPLVFG SVQGFEGQISVFNLKKNSPNLRDLLPESPLKNNIPSCEEFGVIGVSTGLIGVLQANEAIKIILKKGQILDGKILIFNLLN MNIKTLTLKADKFTNTINDLSEFEDFYKDIECQDNIKINKIDSTTFETLYRSNYNNLLIIDVREKEEFNKYSIKGAISIP LNNLDQKPHLEFIKQESLDKEVFTLCQAGKRSEKASKILMKFKISSKSIEGGIANIKQLIFH
Specific function: Catalyzes the conversion of the sulfur carrier protein CysO to CysO-thiocarboxylate. The reaction is thought to proceed in two steps:first, ATP-dependent activation of CysO as acyl- adenylate (CysO-COOAMP), followed by sulfur transfer to give CysO- thioca
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI7657339, Length=382, Percent_Identity=34.2931937172775, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI4885649, Length=157, Percent_Identity=29.2993630573248, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI23510338, Length=167, Percent_Identity=29.3413173652695, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI23510340, Length=167, Percent_Identity=29.3413173652695, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI38045948, Length=156, Percent_Identity=30.7692307692308, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1787048, Length=230, Percent_Identity=36.5217391304348, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI87082356, Length=233, Percent_Identity=38.1974248927039, Blast_Score=145, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17540406, Length=375, Percent_Identity=33.6, Blast_Score=191, Evalue=6e-49, Organism=Caenorhabditis elegans, GI193203301, Length=141, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6321903, Length=390, Percent_Identity=34.1025641025641, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322639, Length=195, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6325438, Length=161, Percent_Identity=29.1925465838509, Blast_Score=67, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6320598, Length=148, Percent_Identity=29.7297297297297, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582879, Length=363, Percent_Identity=36.6391184573003, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI24660640, Length=136, Percent_Identity=32.3529411764706, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI28573937, Length=190, Percent_Identity=28.4210526315789, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007901 - InterPro: IPR009036 - InterPro: IPR016040 - InterPro: IPR001763 - InterPro: IPR000594 [H]
Pfam domain/function: PF05237 MoeZ_MoeB; PF00581 Rhodanese; PF00899 ThiF [H]
EC number: NA
Molecular weight: Translated: 42853; Mature: 42853
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISIDHKSDSLTLDEEDRYKRHLTLNEIGLKGQLKLKRSSVVCIGAGGLGSSVLIYLAA CEEEEECCCCCEEECCCHHHHHEEEHHHCCCCEEEEEEECCEEEEECCCCCHHHHHHHHH AGIGTIGIVDNDQVEKSNLQRQIIHETNTVGDLKIDSAQERIRRLNPNIEVITFAERINS CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCEEEEEEEHHCCC NNILDIINQFDIVCDCSDNFGTRYLINDACLILDKPLVFGSVQGFEGQISVFNLKKNSPN CCHHHHHCCCEEEEECCCCCCCEEEECCEEEEEECCEEEEECCCCCCEEEEEEEECCCCC LRDLLPESPLKNNIPSCEEFGVIGVSTGLIGVLQANEAIKIILKKGQILDGKILIFNLLN HHHHCCCCCCCCCCCCHHHCCEEEECCCEEEEEECCCEEEEEEECCCEECCEEEEEEECC MNIKTLTLKADKFTNTINDLSEFEDFYKDIECQDNIKINKIDSTTFETLYRSNYNNLLII CCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEE DVREKEEFNKYSIKGAISIPLNNLDQKPHLEFIKQESLDKEVFTLCQAGKRSEKASKILM EECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEE KFKISSKSIEGGIANIKQLIFH EEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure MKISIDHKSDSLTLDEEDRYKRHLTLNEIGLKGQLKLKRSSVVCIGAGGLGSSVLIYLAA CEEEEECCCCCEEECCCHHHHHEEEHHHCCCCEEEEEEECCEEEEECCCCCHHHHHHHHH AGIGTIGIVDNDQVEKSNLQRQIIHETNTVGDLKIDSAQERIRRLNPNIEVITFAERINS CCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCEEEEEEEHHCCC NNILDIINQFDIVCDCSDNFGTRYLINDACLILDKPLVFGSVQGFEGQISVFNLKKNSPN CCHHHHHCCCEEEEECCCCCCCEEEECCEEEEEECCEEEEECCCCCCEEEEEEEECCCCC LRDLLPESPLKNNIPSCEEFGVIGVSTGLIGVLQANEAIKIILKKGQILDGKILIFNLLN HHHHCCCCCCCCCCCCHHHCCEEEECCCEEEEEECCCEEEEEEECCCEECCEEEEEEECC MNIKTLTLKADKFTNTINDLSEFEDFYKDIECQDNIKINKIDSTTFETLYRSNYNNLLII CCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEE DVREKEEFNKYSIKGAISIPLNNLDQKPHLEFIKQESLDKEVFTLCQAGKRSEKASKILM EECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHEEEE KFKISSKSIEGGIANIKQLIFH EEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]