| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966991
Identifier: 123966991
GI number: 123966991
Start: 1544052
End: 1544810
Strand: Direct
Name: 123966991
Synonym: P9515_17581
Alternate gene names: NA
Gene position: 1544052-1544810 (Clockwise)
Preceding gene: 123966989
Following gene: 123967002
Centisome position: 90.6
GC content: 35.31
Gene sequence:
>759_bases ATGAAGAATCTAAATAGTGTTTGTGTCGCCTATTCTGGAGGAGTAGATAGTACATTAGTAGCCTCTTTAGCATTCGAGCA ATTAGGGAGTAAAGCAATAGCTGTAACTGGTGTTTCGCCTGCACTAGCTAAAACATTATTGGATGAAGCAAAAAGTCAAG CAAAATGGATTGGGATTAATCATTTAGAAATTGAGACCTCAGAACTAGATCAATCAAGTTATAGTAAAAATCCTAAAAAT AGATGTTTTGCATGCAAAAAAGAGCTTCACAAACACACCACATACTTATCTAAAAAACTTAACTACAAAATTGTATGTGA TGGAGTGAATCTTGATGATCTAGGCGACTACAGGCCTGGGATTAAAGCAGCAAAAGATGCAGGTGTTGTATCTCCCTTAG CAAAATTCAACTTCACAAAAAAAGATATAAGGGATATCTCAAGAGCATTGGGTTTCCCTTGGTGGGATAAACCTGCTCAA CCTTGTTTATCATCAAGATTTCCTTATGGCAATGAAATAACAAACGAAAGACTAGGCATGGTAGAAAAAGCAGAAGAATA TATTAAAAAAAGAGGCATATCAGAAGTTAGGGTAAGGTGTCATGGTTCTACCGCGAGAATAGAAATTCCCAAAGATGAAT TCAAATTATTTTGTAAAGAATATGATTTTCATGAATTAATTAACTATTTTTCTAACCTAGGATTCAAATGCACCAGCCTA GATCTTGAAGGCTTAGTCAGCGGCAAGCTAAATCGATAA
Upstream 100 bases:
>100_bases TATTCATAATTTCTTAAATTTTTAAAACTTAAGTATGTTTTATCAACTTGAAAATCTCTCTGATGAACAAAGTGAAAAAC TACAAACAATTAGAAATTTC
Downstream 100 bases:
>100_bases ATATCGAAATTTAAATTATTTTTCTTACTTGATTATGTATTTCCAAAGGAGGATTCCTATTAATTACACGTAGGAGATGC TCTTCAGCCATTAAAGCTTG
Product: PP family ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVTGVSPALAKTLLDEAKSQAKWIGINHLEIETSELDQSSYSKNPKN RCFACKKELHKHTTYLSKKLNYKIVCDGVNLDDLGDYRPGIKAAKDAGVVSPLAKFNFTKKDIRDISRALGFPWWDKPAQ PCLSSRFPYGNEITNERLGMVEKAEEYIKKRGISEVRVRCHGSTARIEIPKDEFKLFCKEYDFHELINYFSNLGFKCTSL DLEGLVSGKLNR
Sequences:
>Translated_252_residues MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVTGVSPALAKTLLDEAKSQAKWIGINHLEIETSELDQSSYSKNPKN RCFACKKELHKHTTYLSKKLNYKIVCDGVNLDDLGDYRPGIKAAKDAGVVSPLAKFNFTKKDIRDISRALGFPWWDKPAQ PCLSSRFPYGNEITNERLGMVEKAEEYIKKRGISEVRVRCHGSTARIEIPKDEFKLFCKEYDFHELINYFSNLGFKCTSL DLEGLVSGKLNR >Mature_252_residues MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVTGVSPALAKTLLDEAKSQAKWIGINHLEIETSELDQSSYSKNPKN RCFACKKELHKHTTYLSKKLNYKIVCDGVNLDDLGDYRPGIKAAKDAGVVSPLAKFNFTKKDIRDISRALGFPWWDKPAQ PCLSSRFPYGNEITNERLGMVEKAEEYIKKRGISEVRVRCHGSTARIEIPKDEFKLFCKEYDFHELINYFSNLGFKCTSL DLEGLVSGKLNR
Specific function: Unknown
COG id: COG1606
COG function: function code R; ATP-utilizing enzymes of the PP-loop superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0830 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005232 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF02540 NAD_synthase [H]
EC number: NA
Molecular weight: Translated: 28183; Mature: 28183
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVTGVSPALAKTLLDEAKSQAKWIGIN CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHEECCE HLEIETSELDQSSYSKNPKNRCFACKKELHKHTTYLSKKLNYKIVCDGVNLDDLGDYRPG EEEEEHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC IKAAKDAGVVSPLAKFNFTKKDIRDISRALGFPWWDKPAQPCLSSRFPYGNEITNERLGM CHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH VEKAEEYIKKRGISEVRVRCHGSTARIEIPKDEFKLFCKEYDFHELINYFSNLGFKCTSL HHHHHHHHHHCCCHHEEEEECCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCEEECC DLEGLVSGKLNR CHHHHCCCCCCC >Mature Secondary Structure MKNLNSVCVAYSGGVDSTLVASLAFEQLGSKAIAVTGVSPALAKTLLDEAKSQAKWIGIN CCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHEECCE HLEIETSELDQSSYSKNPKNRCFACKKELHKHTTYLSKKLNYKIVCDGVNLDDLGDYRPG EEEEEHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCC IKAAKDAGVVSPLAKFNFTKKDIRDISRALGFPWWDKPAQPCLSSRFPYGNEITNERLGM CHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHH VEKAEEYIKKRGISEVRVRCHGSTARIEIPKDEFKLFCKEYDFHELINYFSNLGFKCTSL HHHHHHHHHHCCCHHEEEEECCCEEEEECCHHHHHHHHHCCCHHHHHHHHHCCCCEEECC DLEGLVSGKLNR CHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]