| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is dinG
Identifier: 123966984
GI number: 123966984
Start: 1536120
End: 1537568
Strand: Reverse
Name: dinG
Synonym: P9515_17511
Alternate gene names: NA
Gene position: 1537568-1536120 (Counterclockwise)
Preceding gene: 123966986
Following gene: 123966983
Centisome position: 90.22
GC content: 25.12
Gene sequence:
>1449_bases ATGCTTGAAATTTTAAGTCATCAATACTTAAAGAGATTTATTAGATTCCATAAAACAGATTGGAACCATATTTATTCTTT TGGACGAATAATTTCAAAGTGTTTAAAAACAAATGACACTTATCTGATTAACTCAGAAATTTTTTCTACAAATAATTGGA TTCCCGCATTGTTGATTTCTTTATTCTTATTTGAAGAAAATTCAACTTTTGTTTTATCTCAAGAAAAAATAGAATTTTTA AAAAAAAATCAATTAGGTGATTTAAAAAAATTTGGATTTGATTTTATTTTAGAAAATGATCAAATAATTTTTTCAAATCA TCGAGTTTATTTGATCACCCTTGAGAAATTATTGCATGATTTAGATCTTTTTAGTTCTAACAATCATCGCATTATCTTCT CTGGGATTGAAAATATAAAAGAAGATTTAAAAAATAATTTTAGAATTTTATTGTTGAAAAAAAATTGGTTTCATAATTTT GATAAATCATCATCCACATATCAAAAGATTATTGGCACTTATAGTTTTCTCAAAAAGAAGTTTTTCTTAAGGAAATCTTT AAATAATGAATATATTTTTTTAGATAAAGAAGAAATAAATTTTCTTGCACAATTCTTTTATGAACATTCTTCATACTCTG ATCAATTTTTAAAAGTTAGTAATGCTTTATCTGAAGGATGGGCATGCTGGGTTACTTTAGATGAAATAAATTTCGAATGG AATTTTTATTTAGAACCTATCAACGAACTTTCTCTGATTAAAAAATTATTTAATAATAATAAATTTGTTTTTTTATCAGC TTTAAGAAAAGATAATTTTTTTCAAAATTACCTTAAAAAGGAAAGTATAGATATTGATTTAGTGATGAATTTCAAGAGTA ATTTTAATGAAAAAAAAATCGTAGTATATGCTCCGCCCAGACAAATACTCCCAAATAATCCAATGTTCACTCAAATTATT ATTGATAAGTGTAAAAAGCTTATAATATTCAGAAAAGGACTTACTTTAATTTTATCTGATGATCTTAATTTAAAGCATAA CCTTGCTACAGAACTAGCTTCTACTCATGGAAAGCAAGTCTTGCTAGAGACTATTCCTTCGCATAATAATGAAATTCTAT GTGCTAGTTATGTGTGGTGGATTAATAATTCTTATTTAATAAAAAGTCCTGAACAAATAATTATTCCACTGCTACCTATC CCAAATATGTCAGAACCAATAAATGAAATTACCGTTTTAAATAAAATAAATCTTTCCAAAGATTGGTTTCGAGAATTTTT ACTTCCGGAGGCAATACAAAAATTAGAAAGATCAATTTCACCTCTAAGAAAAAACTCTGGTAAATTAATAATTCTTGATG GAAGATTAAATAAAAGGAAATGGGGTAGATCAATTTTGCAAAGTATTCAGCCATCTAAACAAATAAACTATGTGCTTCCT TACGATTAA
Upstream 100 bases:
>100_bases TATTCATTGATTTACTAATTTGAGACTTTTTATATTAATACCAATATTTTGTATATTAGGATCATGATTTTTCTTTATTG GACATCACTAAAATTATATA
Downstream 100 bases:
>100_bases GTTATTATTCAGGAAATATCTTTTAATATGGGAGAAGCAAAAAGGAGAAAATCGTTAGGTCTTCCTCCTAAAAAATACAA ATCTAAATCTAAATCAGATC
Product: Rad3-related DNA helicase
Products: NA
Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP YD
Sequences:
>Translated_482_residues MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP YD >Mature_482_residues MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP YD
Specific function: Unknown
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57175; Mature: 57175
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLIS CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCHHHHHHH LFLFEENSTFVLSQEKIEFLKKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHD HHHCCCCCEEEEEHHHHHHHHHCCCCCHHHCCCEEEEECCEEEEECCEEEEEEHHHHHHH LDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNFDKSSSTYQKIIGTYSFLKKK HHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH FFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW HHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECEEE NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKI EEEECCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE VVYAPPRQILPNNPMFTQIIIDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQV EEECCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE LLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPIPNMSEPINEITVLNKINLSK EEHHCCCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCHHHEEEEEECCCCH DWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEC YD CC >Mature Secondary Structure MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLIS CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCHHHHHHH LFLFEENSTFVLSQEKIEFLKKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHD HHHCCCCCEEEEEHHHHHHHHHCCCCCHHHCCCEEEEECCEEEEECCEEEEEEHHHHHHH LDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNFDKSSSTYQKIIGTYSFLKKK HHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH FFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW HHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECEEE NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKI EEEECCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE VVYAPPRQILPNNPMFTQIIIDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQV EEECCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE LLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPIPNMSEPINEITVLNKINLSK EEHHCCCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCHHHEEEEEECCCCH DWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEC YD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA