| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966941
Identifier: 123966941
GI number: 123966941
Start: 1508931
End: 1510784
Strand: Reverse
Name: 123966941
Synonym: P9515_17081
Alternate gene names: NA
Gene position: 1510784-1508931 (Counterclockwise)
Preceding gene: 123966942
Following gene: 123966940
Centisome position: 88.65
GC content: 39.54
Gene sequence:
>1854_bases ATGAGTTCTTATATTCTTGGTCTGTCTTGTTATTACCATGATAGTGCTGCTGCTCTAATAAAGGATGGTGAGATAATTGC TGCTGCACAAGAAGAAAGATTCTCTCGAAAAAAGCATGATTCTAGCTTTCCTAAGAATGCAATTTACTACTGCCTTAAAT CTCAGGGAATCACTCTTTCAGATATCAAAGAGATAGTATATTATGAGAAACCTCTTCTTACATTTGAACGTCTTCTCGAG ACTTATTTAGGCGCTGCGCCAAGAGGAGGCAGATCATTCATTGCAGCAATGCAAGTTTGGTTGAAGGAAAAGCTATTCTT AAAAACTGAACTTCAAAAGAATCTTAAAGAGGTACAAGCATCTTTTGAATCTGAGATTAATGTTATACCAAATTTACTTT TTTCAGAGCATCATCTTTCTCATGCTTCTGCTGCTTTCTATCCAAGCCCCTTTGAGGAGTCTATAGTCTTATGCATGGAT GGAGTGGGCGAGTGGGCAACAACCTCTGCTTGGATTGGTAAAGGTAAAAGCATTAAACCACTCTGGGAAATAAGTTTTCC TCATTCCCTTGGTTTGCTGTATTCCTCCTTTACTTATTATTGCGGATTTAAGGTCAATTCTGGTGAATATAAACTAATGG GTCTTGCTCCTTATGGCGAACCTAAATATGTCGATAAGATCAAGAAACATTTGATTGACATAAAAGAAGACGGTACATTC CGTCTGGATATAAGTTACTTTAAATACCATCGAGGATTCCGTATGACAGGACGGAAGTTCCACGAACTATTTGGTAAACA ACCTCGAAAATCAGAAACGGAACTTACCCAGTTCCATATGGACTTGGCGGCATCAATCCAGGCAGTTACGGAAGAGGTTG TCCTGAAGTTAGCAAAATCGCTTAGGCAAGAAACTGGCATCAAGAATATATGTCTAGCTGGAGGAGTTGCTCTTAATTGT GTTGCTAATGGTAAATTGCTACTAGAAAAGATCTTTGATAATATTTGGATTCAACCTGCAAGTGGGGATGCCGGTTCTGC ACTGGGCGCAGCCTTGGTTGGTTGGCATCAACATCACCAACAGGAAAGGATTACTAATACTAATGACTCCATGAAGGGTA CCTACCTGGGTCCCGAGTTTAGTAATGAAGAAATAACAAAATACCTTCATAGAATTAGTGCTCCTTACCACACTCACGTT GATGTTGATTTATTTGAACTTTTAGCAGAAGAATTAGAGAAGGGTCATGTAATTGGTTGGTTCAATGGTCCTATGGAGTT TGGCCCGCGTTCCTTAGGAGGAAGGTCGATCCTTGGTGATCCACGAAATCAAAAAATGCAGAGCCTGATGAACCTGAAAA TTAAGTTTAGAGAGAGTTTCAGGCCATTTGCTCCATCTGTACTCGAAGAAGATGTCAGCAATCAGTTCGAGATGAGTACC AAAAGTCCATATATGCTATTGGTTGCCCCAGTAAAAAAGGAACTCTGTATTCAAATGACAGAAGAGCAAGATAAACTCTT TGGAATTGAGAAACTCAATATCCGTAGGTCATCATTGCCCGCTATTACCCATGTGGATTACTCAGCAAGAGTTCAGACTG TAAGTAGCACCACAAATCCAAGATACTATAAATTAATTGATGCTTTCAAGCGAAAAACTGGTTGCCCCACCATCGTGAAT ACTTCATTCAATGTTAGAGGTGAACCAATTGTCTGTACTCCACAGGATGCTTATAGATGTTTTATGAGGACAGAGATGGA TATTCTAGTTCTTCAAAATCAAATTCTTTTTAAGGGGGAGCAACCTAAGGTAGAGAAAGATGAAAAATGGATGCAGGAGT TTGCACTGGATTGA
Upstream 100 bases:
>100_bases AAATTTAATTTAAAATCAATGTAGGTTAAATAGTAGTTGTCTATTTTTCTTTTTTAAAAGTAGAGTATTAAGGAAATATA TAATATCTCGATTGTATCCG
Downstream 100 bases:
>100_bases TCATGAAAGAAACAATTTCAAAAAAACAACTACGAGAGTTCGGATTTCTTATTGGTTTTGGATTGCCCATATTGATTGGT TGGTTACTTCCTGTACTTGC
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MSSYILGLSCYYHDSAAALIKDGEIIAAAQEERFSRKKHDSSFPKNAIYYCLKSQGITLSDIKEIVYYEKPLLTFERLLE TYLGAAPRGGRSFIAAMQVWLKEKLFLKTELQKNLKEVQASFESEINVIPNLLFSEHHLSHASAAFYPSPFEESIVLCMD GVGEWATTSAWIGKGKSIKPLWEISFPHSLGLLYSSFTYYCGFKVNSGEYKLMGLAPYGEPKYVDKIKKHLIDIKEDGTF RLDISYFKYHRGFRMTGRKFHELFGKQPRKSETELTQFHMDLAASIQAVTEEVVLKLAKSLRQETGIKNICLAGGVALNC VANGKLLLEKIFDNIWIQPASGDAGSALGAALVGWHQHHQQERITNTNDSMKGTYLGPEFSNEEITKYLHRISAPYHTHV DVDLFELLAEELEKGHVIGWFNGPMEFGPRSLGGRSILGDPRNQKMQSLMNLKIKFRESFRPFAPSVLEEDVSNQFEMST KSPYMLLVAPVKKELCIQMTEEQDKLFGIEKLNIRRSSLPAITHVDYSARVQTVSSTTNPRYYKLIDAFKRKTGCPTIVN TSFNVRGEPIVCTPQDAYRCFMRTEMDILVLQNQILFKGEQPKVEKDEKWMQEFALD
Sequences:
>Translated_617_residues MSSYILGLSCYYHDSAAALIKDGEIIAAAQEERFSRKKHDSSFPKNAIYYCLKSQGITLSDIKEIVYYEKPLLTFERLLE TYLGAAPRGGRSFIAAMQVWLKEKLFLKTELQKNLKEVQASFESEINVIPNLLFSEHHLSHASAAFYPSPFEESIVLCMD GVGEWATTSAWIGKGKSIKPLWEISFPHSLGLLYSSFTYYCGFKVNSGEYKLMGLAPYGEPKYVDKIKKHLIDIKEDGTF RLDISYFKYHRGFRMTGRKFHELFGKQPRKSETELTQFHMDLAASIQAVTEEVVLKLAKSLRQETGIKNICLAGGVALNC VANGKLLLEKIFDNIWIQPASGDAGSALGAALVGWHQHHQQERITNTNDSMKGTYLGPEFSNEEITKYLHRISAPYHTHV DVDLFELLAEELEKGHVIGWFNGPMEFGPRSLGGRSILGDPRNQKMQSLMNLKIKFRESFRPFAPSVLEEDVSNQFEMST KSPYMLLVAPVKKELCIQMTEEQDKLFGIEKLNIRRSSLPAITHVDYSARVQTVSSTTNPRYYKLIDAFKRKTGCPTIVN TSFNVRGEPIVCTPQDAYRCFMRTEMDILVLQNQILFKGEQPKVEKDEKWMQEFALD >Mature_616_residues SSYILGLSCYYHDSAAALIKDGEIIAAAQEERFSRKKHDSSFPKNAIYYCLKSQGITLSDIKEIVYYEKPLLTFERLLET YLGAAPRGGRSFIAAMQVWLKEKLFLKTELQKNLKEVQASFESEINVIPNLLFSEHHLSHASAAFYPSPFEESIVLCMDG VGEWATTSAWIGKGKSIKPLWEISFPHSLGLLYSSFTYYCGFKVNSGEYKLMGLAPYGEPKYVDKIKKHLIDIKEDGTFR LDISYFKYHRGFRMTGRKFHELFGKQPRKSETELTQFHMDLAASIQAVTEEVVLKLAKSLRQETGIKNICLAGGVALNCV ANGKLLLEKIFDNIWIQPASGDAGSALGAALVGWHQHHQQERITNTNDSMKGTYLGPEFSNEEITKYLHRISAPYHTHVD VDLFELLAEELEKGHVIGWFNGPMEFGPRSLGGRSILGDPRNQKMQSLMNLKIKFRESFRPFAPSVLEEDVSNQFEMSTK SPYMLLVAPVKKELCIQMTEEQDKLFGIEKLNIRRSSLPAITHVDYSARVQTVSSTTNPRYYKLIDAFKRKTGCPTIVNT SFNVRGEPIVCTPQDAYRCFMRTEMDILVLQNQILFKGEQPKVEKDEKWMQEFALD
Specific function: Unknown
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 70192; Mature: 70061
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYILGLSCYYHDSAAALIKDGEIIAAAQEERFSRKKHDSSFPKNAIYYCLKSQGITLS CCCEEEEEEEEEECCCCEEEECCCEEEECHHHHHHHHHCCCCCCCHHEEEEECCCCCCHH DIKEIVYYEKPLLTFERLLETYLGAAPRGGRSFIAAMQVWLKEKLFLKTELQKNLKEVQA HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFESEINVIPNLLFSEHHLSHASAAFYPSPFEESIVLCMDGVGEWATTSAWIGKGKSIKP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHCCHHHHCCCCCCCC LWEISFPHSLGLLYSSFTYYCGFKVNSGEYKLMGLAPYGEPKYVDKIKKHLIDIKEDGTF EEEECCCHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEE RLDISYFKYHRGFRMTGRKFHELFGKQPRKSETELTQFHMDLAASIQAVTEEVVLKLAKS EEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQETGIKNICLAGGVALNCVANGKLLLEKIFDNIWIQPASGDAGSALGAALVGWHQHHQ HHHHCCCCCEEEECCEEEEEECCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH QERITNTNDSMKGTYLGPEFSNEEITKYLHRISAPYHTHVDVDLFELLAEELEKGHVIGW HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEE FNGPMEFGPRSLGGRSILGDPRNQKMQSLMNLKIKFRESFRPFAPSVLEEDVSNQFEMST ECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHEECCC KSPYMLLVAPVKKELCIQMTEEQDKLFGIEKLNIRRSSLPAITHVDYSARVQTVSSTTNP CCCEEEEEECCCHHHHHHHHCCHHHHCCCCEECCCCCCCCEEEECCHHHEEEEECCCCCC RYYKLIDAFKRKTGCPTIVNTSFNVRGEPIVCTPQDAYRCFMRTEMDILVLQNQILFKGE HHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECHHEECCC QPKVEKDEKWMQEFALD CCCCCHHHHHHHHHCCC >Mature Secondary Structure SSYILGLSCYYHDSAAALIKDGEIIAAAQEERFSRKKHDSSFPKNAIYYCLKSQGITLS CCEEEEEEEEEECCCCEEEECCCEEEECHHHHHHHHHCCCCCCCHHEEEEECCCCCCHH DIKEIVYYEKPLLTFERLLETYLGAAPRGGRSFIAAMQVWLKEKLFLKTELQKNLKEVQA HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFESEINVIPNLLFSEHHLSHASAAFYPSPFEESIVLCMDGVGEWATTSAWIGKGKSIKP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHCCHHHHCCCCCCCC LWEISFPHSLGLLYSSFTYYCGFKVNSGEYKLMGLAPYGEPKYVDKIKKHLIDIKEDGTF EEEECCCHHHHHHHHCCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEE RLDISYFKYHRGFRMTGRKFHELFGKQPRKSETELTQFHMDLAASIQAVTEEVVLKLAKS EEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRQETGIKNICLAGGVALNCVANGKLLLEKIFDNIWIQPASGDAGSALGAALVGWHQHHQ HHHHCCCCCEEEECCEEEEEECCCHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH QERITNTNDSMKGTYLGPEFSNEEITKYLHRISAPYHTHVDVDLFELLAEELEKGHVIGW HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCEEEE FNGPMEFGPRSLGGRSILGDPRNQKMQSLMNLKIKFRESFRPFAPSVLEEDVSNQFEMST ECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEHHCCCCCCHHHHHHHHHHHEECCC KSPYMLLVAPVKKELCIQMTEEQDKLFGIEKLNIRRSSLPAITHVDYSARVQTVSSTTNP CCCEEEEEECCCHHHHHHHHCCHHHHCCCCEECCCCCCCCEEEECCHHHEEEEECCCCCC RYYKLIDAFKRKTGCPTIVNTSFNVRGEPIVCTPQDAYRCFMRTEMDILVLQNQILFKGE HHHHHHHHHHHCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEECHHEECCC QPKVEKDEKWMQEFALD CCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]