Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966940

Identifier: 123966940

GI number: 123966940

Start: 1508536

End: 1508958

Strand: Reverse

Name: 123966940

Synonym: P9515_17071

Alternate gene names: NA

Gene position: 1508958-1508536 (Counterclockwise)

Preceding gene: 123966941

Following gene: 123966936

Centisome position: 88.54

GC content: 37.35

Gene sequence:

>423_bases
ATGGATGCAGGAGTTTGCACTGGATTGATCATGAAAGAAACAATTTCAAAAAAACAACTACGAGAGTTCGGATTTCTTAT
TGGTTTTGGATTGCCCATATTGATTGGTTGGTTACTTCCTGTACTTGCTGGCCATGGATTCAGGTTATGGACTGTTTGGA
TTGGCTTTCCAGCATTTATAATAGGTATGGCTTCACCTCGACTATTGTATTATCCATACAAAATTTGGATAGCACTTGGT
CATGCCCTTGGATGGGTTAATAGCAAAATTATCCTTGGTCTTATTTTCATAGTTATTCTTTTACCGATTGCATTTATAAT
GCGTATTACCGGATATGACTCATTAAGAACTAGACGAAAAGGAGAGAAGACCTACCGAGAAAACAGGCAAGATCATCAAA
CAGACCTCAAACGTATTTTTTGA

Upstream 100 bases:

>100_bases
ATGCTTATAGATGTTTTATGAGGACAGAGATGGATATTCTAGTTCTTCAAAATCAAATTCTTTTTAAGGGGGAGCAACCT
AAGGTAGAGAAAGATGAAAA

Downstream 100 bases:

>100_bases
ACAATGAAAGCATTCTTTGATTTAGTTATAGACATTTGGGACTTTATGAAAGTTCGCAAAAAGTATTGGTTGGCACCTTT
GATTATTACGATTGTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDAGVCTGLIMKETISKKQLREFGFLIGFGLPILIGWLLPVLAGHGFRLWTVWIGFPAFIIGMASPRLLYYPYKIWIALG
HALGWVNSKIILGLIFIVILLPIAFIMRITGYDSLRTRRKGEKTYRENRQDHQTDLKRIF

Sequences:

>Translated_140_residues
MDAGVCTGLIMKETISKKQLREFGFLIGFGLPILIGWLLPVLAGHGFRLWTVWIGFPAFIIGMASPRLLYYPYKIWIALG
HALGWVNSKIILGLIFIVILLPIAFIMRITGYDSLRTRRKGEKTYRENRQDHQTDLKRIF
>Mature_140_residues
MDAGVCTGLIMKETISKKQLREFGFLIGFGLPILIGWLLPVLAGHGFRLWTVWIGFPAFIIGMASPRLLYYPYKIWIALG
HALGWVNSKIILGLIFIVILLPIAFIMRITGYDSLRTRRKGEKTYRENRQDHQTDLKRIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16094; Mature: 16094

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAGVCTGLIMKETISKKQLREFGFLIGFGLPILIGWLLPVLAGHGFRLWTVWIGFPAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGMASPRLLYYPYKIWIALGHALGWVNSKIILGLIFIVILLPIAFIMRITGYDSLRTRRK
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GEKTYRENRQDHQTDLKRIF
HHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MDAGVCTGLIMKETISKKQLREFGFLIGFGLPILIGWLLPVLAGHGFRLWTVWIGFPAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IGMASPRLLYYPYKIWIALGHALGWVNSKIILGLIFIVILLPIAFIMRITGYDSLRTRRK
HHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
GEKTYRENRQDHQTDLKRIF
HHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA