Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is yfdH [C]

Identifier: 123966910

GI number: 123966910

Start: 1473266

End: 1474357

Strand: Direct

Name: yfdH [C]

Synonym: P9515_16771

Alternate gene names: 123966910

Gene position: 1473266-1474357 (Clockwise)

Preceding gene: 123966909

Following gene: 123966911

Centisome position: 86.45

GC content: 28.75

Gene sequence:

>1092_bases
ATGAAATCTGTTAATACATGGAATCTTTCAAATAATAAAATTCACCAATTATTTAAAAACGATGATGAATTTATTTCTCT
TAAGGTAAGAGGTAATACTTGGGAACCAATTACAAGATGGCTCAAATTAGATTCAAGAATATTCAAAGGCACAACTAGCA
AAGCAAGAATTACTTTATGTGATATTGAATCATTAGCTGAAATTTATAATTATAGATCTATTAGATGGACAGCAAAAAAA
TTAACTCCAATACCAACTAAATTAATTCCTCAATTTATAAAAAATACTTTACGTAAGGTACCCATAATAAAGCAACTTGC
TTTTGAATTAGAAATAATATTTTATAAATATAAGGAAAAAGTAGGCGATCATTTAATTTCAATAGTTATTCCTGCAAGAA
ATGAGGAGGGTAATAGGAAACTTTTAATAGAAGCACTAAATAAATTTAAAAAAATTCCTAATAAAGTTGAAATAATCTTT
GTGGAGGGAAACAGCAAAGATAAAACTTTTCAAATGTTAGAAGAGCTTACTAAAAATTTTTCAAACAGCTTCCAAATATC
TCTTTTAAAACAAACATCTAATGGTAAGAAAAATGCAGTTGTTGAGGGTTTCAATATTTCATCCGGTGAAACTTTGGCAA
TTATAGATAGCGATTTTACAGTAGACGTCAATGACAGTATCGAAGCAATAATGCAATCGACGAAAAATGAGAATATCCTT
GTTAATTGCTCTAGAACAACATTCCCAATGGAAAAAGATGCTATGAGATGGGCTAATTATATCGGGAATAGATGTTTTGC
TTTATTGTTATCTATATTAATAAATAAACCAATTTCTGATTCACTATGCGGGACAAAAGTTTTCTCAAGAAAGTTTTTCA
ATTTGATGAGAAAAAATGGTAGTTGGGAATCTAAATCAGATCCTTTTGGTGATTTTACGATAATTTTTGAGGCAGCCAAT
AATAATATTAAAATCCTTAATTACCCTGTCAGATATTATGCAAGAAAATCTGGGTCACCAAATATATCGAGATGGATAGA
TGGGATCAAACTTCTTAAGGTATGTTGGAAATATATGATTTCAGACCTTTAA

Upstream 100 bases:

>100_bases
TTTCAAATAATTTATGATTATGAAATTTTATCTCCTTGGAAATTAATAAGAAAAAATCGATGAATGTATATTAAGATTGT
TTTGATAAAAATTAAATTTA

Downstream 100 bases:

>100_bases
AATAAAAAATAATTTTTATTTTTCGGAAGTAAATTTATAAAAATTCACCAAAAAGGTAATAAAATAGTTAGATTCTAAAT
GTTAGAGCATTTTAAATCTC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Dolichyl-Phosphate Beta-D-Mannosyltransferase; Methyltransferase Domain Family; Dolichol-Phosphate Mannosyltransferase; Glycosyl Transferase Family 2 Protein; Methyltransferase Type; Fused Dolichol-Phosphate Mannosyltransferase/ Protein; Mannosyltransferase; Family 2 Glycosyl Transferase; Dolichol-P-Glucose Synthetase; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKSVNTWNLSNNKIHQLFKNDDEFISLKVRGNTWEPITRWLKLDSRIFKGTTSKARITLCDIESLAEIYNYRSIRWTAKK
LTPIPTKLIPQFIKNTLRKVPIIKQLAFELEIIFYKYKEKVGDHLISIVIPARNEEGNRKLLIEALNKFKKIPNKVEIIF
VEGNSKDKTFQMLEELTKNFSNSFQISLLKQTSNGKKNAVVEGFNISSGETLAIIDSDFTVDVNDSIEAIMQSTKNENIL
VNCSRTTFPMEKDAMRWANYIGNRCFALLLSILINKPISDSLCGTKVFSRKFFNLMRKNGSWESKSDPFGDFTIIFEAAN
NNIKILNYPVRYYARKSGSPNISRWIDGIKLLKVCWKYMISDL

Sequences:

>Translated_363_residues
MKSVNTWNLSNNKIHQLFKNDDEFISLKVRGNTWEPITRWLKLDSRIFKGTTSKARITLCDIESLAEIYNYRSIRWTAKK
LTPIPTKLIPQFIKNTLRKVPIIKQLAFELEIIFYKYKEKVGDHLISIVIPARNEEGNRKLLIEALNKFKKIPNKVEIIF
VEGNSKDKTFQMLEELTKNFSNSFQISLLKQTSNGKKNAVVEGFNISSGETLAIIDSDFTVDVNDSIEAIMQSTKNENIL
VNCSRTTFPMEKDAMRWANYIGNRCFALLLSILINKPISDSLCGTKVFSRKFFNLMRKNGSWESKSDPFGDFTIIFEAAN
NNIKILNYPVRYYARKSGSPNISRWIDGIKLLKVCWKYMISDL
>Mature_363_residues
MKSVNTWNLSNNKIHQLFKNDDEFISLKVRGNTWEPITRWLKLDSRIFKGTTSKARITLCDIESLAEIYNYRSIRWTAKK
LTPIPTKLIPQFIKNTLRKVPIIKQLAFELEIIFYKYKEKVGDHLISIVIPARNEEGNRKLLIEALNKFKKIPNKVEIIF
VEGNSKDKTFQMLEELTKNFSNSFQISLLKQTSNGKKNAVVEGFNISSGETLAIIDSDFTVDVNDSIEAIMQSTKNENIL
VNCSRTTFPMEKDAMRWANYIGNRCFALLLSILINKPISDSLCGTKVFSRKFFNLMRKNGSWESKSDPFGDFTIIFEAAN
NNIKILNYPVRYYARKSGSPNISRWIDGIKLLKVCWKYMISDL

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.- [C]

Molecular weight: Translated: 41943; Mature: 41943

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVNTWNLSNNKIHQLFKNDDEFISLKVRGNTWEPITRWLKLDSRIFKGTTSKARITLC
CCCCCEECCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
DIESLAEIYNYRSIRWTAKKLTPIPTKLIPQFIKNTLRKVPIIKQLAFELEIIFYKYKEK
CHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VGDHLISIVIPARNEEGNRKLLIEALNKFKKIPNKVEIIFVEGNSKDKTFQMLEELTKNF
HCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHC
SNSFQISLLKQTSNGKKNAVVEGFNISSGETLAIIDSDFTVDVNDSIEAIMQSTKNENIL
CCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCEEEECCHHHHHHHHHCCCCCEE
VNCSRTTFPMEKDAMRWANYIGNRCFALLLSILINKPISDSLCGTKVFSRKFFNLMRKNG
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
SWESKSDPFGDFTIIFEAANNNIKILNYPVRYYARKSGSPNISRWIDGIKLLKVCWKYMI
CCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
SDL
HCC
>Mature Secondary Structure
MKSVNTWNLSNNKIHQLFKNDDEFISLKVRGNTWEPITRWLKLDSRIFKGTTSKARITLC
CCCCCEECCCCHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEE
DIESLAEIYNYRSIRWTAKKLTPIPTKLIPQFIKNTLRKVPIIKQLAFELEIIFYKYKEK
CHHHHHHHHCCCCEEEEHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
VGDHLISIVIPARNEEGNRKLLIEALNKFKKIPNKVEIIFVEGNSKDKTFQMLEELTKNF
HCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHC
SNSFQISLLKQTSNGKKNAVVEGFNISSGETLAIIDSDFTVDVNDSIEAIMQSTKNENIL
CCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCEEEECCHHHHHHHHHCCCCCEE
VNCSRTTFPMEKDAMRWANYIGNRCFALLLSILINKPISDSLCGTKVFSRKFFNLMRKNG
EEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
SWESKSDPFGDFTIIFEAANNNIKILNYPVRYYARKSGSPNISRWIDGIKLLKVCWKYMI
CCCCCCCCCCCEEEEEEECCCCEEEEECCHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
SDL
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA