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The map label for this gene is gidB

Identifier: 123966888

GI number: 123966888

Start: 1446164

End: 1446826

Strand: Direct

Name: gidB

Synonym: P9515_16551

Alternate gene names: 123966888

Gene position: 1446164-1446826 (Clockwise)

Preceding gene: 123966885

Following gene: 123966901

Centisome position: 84.86

GC content: 28.96

Gene sequence:

>663_bases
ATGATGTTTCAAGAATTACGGATAAGAATTCAAGAATTAAATTATAAAACCAACTTAACTAGGTTAATCGAAGGAGATGA
TTATTGGATTTCTCAAGTATATGACAGTCTTTGGACATTTAAAGAAAATTCAAAAAAAATTTTTGATAATAAAAAATTTA
TTGATATTGGATCAGGTTGTGGTTTCCCAGGATTTGCCTATGCAATAACACATCCCAATTCAGAGATATATTTAGTAGAT
TCCTCCAAAAAAAAAACAGATTCACTAAAAGAAATTATCAAAAGAATGAATTTCAAAAATAATATATTTGTAATAAATGA
TCGTATTGAAAACGTTGGGCGTCAATCTTCATTCAAAAAGAGTTTTAATATTGCAACCGCAAGAGCAGTGAGTAATCCTT
CAACAGTTGCAGAATATATATTGCCTATGTTGGAACAGAATGGATTAGGTATTTTATATTGTGGGAAGTGGAGAAATGAA
GATAATAAAAATTTAGAAAATACATTAAATGTTTTAGAAGGAAAAATAATGGAAATCAAAAGTAAATCTCTTCCTAAAGA
AAAGGGCATCCGTAATGTTATCTTTATTAAGCCAAAGGCATCTTGTCCTGATATTTTCCCTAGAAGTATTGGGAAGGCTG
AAAAATATCCCCTAAAAGGTTAA

Upstream 100 bases:

>100_bases
GAACGTATCTAATAAACGCGAAGAAGAGACTATTTAAAATTCAATGACAAAAGAAAGTATCCCAAAAGAACTATTAAAAT
TAATAACGGGAGAGGAAATA

Downstream 100 bases:

>100_bases
TTTTTTGATAATCTCGTTAATGATTTTTTTCCAAATTTTTCTTTTAGGACTCTTAATTTCTTTATGACCTCTTTGGGTTT
CATATGCCTTTCTAAAACTT

Product: putative glucose inhibited division protein B

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSEIYLVD
SSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKKSFNIATARAVSNPSTVAEYILPMLEQNGLGILYCGKWRNE
DNKNLENTLNVLEGKIMEIKSKSLPKEKGIRNVIFIKPKASCPDIFPRSIGKAEKYPLKG

Sequences:

>Translated_220_residues
MMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSEIYLVD
SSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKKSFNIATARAVSNPSTVAEYILPMLEQNGLGILYCGKWRNE
DNKNLENTLNVLEGKIMEIKSKSLPKEKGIRNVIFIKPKASCPDIFPRSIGKAEKYPLKG
>Mature_220_residues
MMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGCGFPGFAYAITHPNSEIYLVD
SSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKKSFNIATARAVSNPSTVAEYILPMLEQNGLGILYCGKWRNE
DNKNLENTLNVLEGKIMEIKSKSLPKEKGIRNVIFIKPKASCPDIFPRSIGKAEKYPLKG

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_PROM5 (A2BYK1)

Other databases:

- EMBL:   CP000552
- RefSeq:   YP_001011969.1
- ProteinModelPortal:   A2BYK1
- SMR:   A2BYK1
- STRING:   A2BYK1
- GeneID:   4720458
- GenomeReviews:   CP000552_GR
- KEGG:   pmc:P9515_16551
- eggNOG:   COG0357
- HOGENOM:   HBG686577
- ProtClustDB:   CLSK922200
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.-

Molecular weight: Translated: 25335; Mature: 25335

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGC
CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
GFPGFAYAITHPNSEIYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKK
CCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECHHHHCCCHHHHHH
SFNIATARAVSNPSTVAEYILPMLEQNGLGILYCGKWRNEDNKNLENTLNVLEGKIMEIK
HCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
SKSLPKEKGIRNVIFIKPKASCPDIFPRSIGKAEKYPLKG
HHCCCHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure
MMFQELRIRIQELNYKTNLTRLIEGDDYWISQVYDSLWTFKENSKKIFDNKKFIDIGSGC
CCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC
GFPGFAYAITHPNSEIYLVDSSKKKTDSLKEIIKRMNFKNNIFVINDRIENVGRQSSFKK
CCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECHHHHCCCHHHHHH
SFNIATARAVSNPSTVAEYILPMLEQNGLGILYCGKWRNEDNKNLENTLNVLEGKIMEIK
HCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH
SKSLPKEKGIRNVIFIKPKASCPDIFPRSIGKAEKYPLKG
HHCCCHHHCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA