| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966859
Identifier: 123966859
GI number: 123966859
Start: 1421908
End: 1422975
Strand: Reverse
Name: 123966859
Synonym: P9515_16261
Alternate gene names: NA
Gene position: 1422975-1421908 (Counterclockwise)
Preceding gene: 123966860
Following gene: 123966854
Centisome position: 83.5
GC content: 34.18
Gene sequence:
>1068_bases ATGGACATTTCACCTACAATTTTTATTATTCCAACTGGGATTGGATGTGAAATCGGAGGTTTTGCTGGAGATTCCCTCCC TGCTGCAAAATTGTTAGCCTCCGCAAGTGGATGCTTAATTACTCATCCCAATGTTATGAATGGGGGTTCTCTTGCAGAAA AACACAAAGATATTTTTTATGTCGAAGGTTATAGCTTAGATAGATTTGCTAAAGGAGAAATTGGCCTCAAAAGTGTAAAA CAGCAGAAAATTGGAATAATTTTTGATTCAAGCATTGAACATGAAATATTAATAAGACATTTACAAGTCGCAGATGCTTG TGTCGCAACATTAGGAATTGATGTTGATTCTTATGTATTAACAAAAAAGCCTTTAGGAATAAGTATTGATTCTGAATCAC AAGGTATCAGCGAAGGTTTAATTGAAAATCCCGATACTTTAATTGAAGCAGGAGAAATGTTGATAAATAAAGGTATGACG GCAATAGCGATAGTAGCTAAATTCCCTGATGATTTAGATTTAGTTGAAACAAATTCATATAGGGAGGGAAAAGGTGTTGA TCCCATAGCAGGAGTTGAGGCTGTAATAAGTCATTTGATAAGTAAGTTTCTCAAAGTTCCCTGTGCACATGCACCTGCAT TAAGTCCAATTGAATTGAATGAAAATTTAGATCCTCGGGCGGCTTCCGAAGAAATAGGATATACATTTTTGCCCTCAGTA TTGATTGGTTTAAGTAAGGCTCCAGATCTTATAGAATTATCTGATAAAAGCGACAGTATTACCTTACACCCAAGTCATGT CGAATCTATTGTGATTCCAAGTGGTTCATTAGGCGGAGAAGCAGTTTTAGCCGGAATGGAAAGAGGATTAAATATAATTG CTGTAAAAAATCAAAATATTATAAACCTTGATAATAATATTTATAACTATCCTAAACTCATTGAGGTGGATAATTATTTT GAGGCATCAGGTTTAGTTCTTGCTATAAGAGAAGGAATTAACCCTAAATCAATTAAAAGACCTTTAAATAAAATTCAAGA AATGACTTTTAAAAAGATGGGATCTTAG
Upstream 100 bases:
>100_bases GATATAAAAGCTTCAGTAGAATCATCTCATGTAAAGAAAATAAGAATTAAAGCTGTTTTAGAAAAACAAATCAATTCATC AATATAAATCAAGATAGTAA
Downstream 100 bases:
>100_bases TAAGAAATTGCAATTGGGACTCTCCAGTCACTTCCCAGTGATTGACTACTTAGTTTTAGTATAGGAGGAGCTTGTTTTCT TTTGAATTCGGCTTTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS
Sequences:
>Translated_355_residues MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS >Mature_355_residues MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021763 [H]
Pfam domain/function: PF11805 DUF3326 [H]
EC number: NA
Molecular weight: Translated: 38012; Mature: 38012
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFY CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCEEE VEGYSLDRFAKGEIGLKSVKQQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVL EECCCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE TKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMTAIAIVAKFPDDLDLVETNSY ECCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCC REGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHH LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNI HHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCE INLDNNIYNYPKLIEVDNYFEASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS EECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFY CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCEEE VEGYSLDRFAKGEIGLKSVKQQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVL EECCCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE TKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMTAIAIVAKFPDDLDLVETNSY ECCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCC REGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHH LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNI HHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCE INLDNNIYNYPKLIEVDNYFEASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS EECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3041005 [H]