| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966676
Identifier: 123966676
GI number: 123966676
Start: 1277668
End: 1278195
Strand: Direct
Name: 123966676
Synonym: P9515_14431
Alternate gene names: NA
Gene position: 1277668-1278195 (Clockwise)
Preceding gene: 123966671
Following gene: 123966682
Centisome position: 74.97
GC content: 28.22
Gene sequence:
>528_bases ATGAAAAAAAAAACCATAAACTTAAAAGAAGCTTCTTTTACTCAGGCAATAAACATATCAGCTCAATGGTGTAAAGAGTG GGGAGAAGATCTTTTAAGCGAAGAAGTGTTAGCAGATAGAATGGCAGAATTAATTAAAACAAAAAATGGATTGAGAGGTT TTTTTGCATATGCTTTGTCAGATCAAGATTGTTATTTATTAGATAAACTACCTTTTTCAGTTGTTTTTAAACTTCAAGAG TGTGGAAAGGATGTAGTCGAAATAGTAATTAAAAATCTAATTATGAGCTCTGCTCAAATCATTGTTCATGATAGAGAAAA TAATCTTGAGTATAAATCTAATTCTGAAAACATTTCAGAGAGATGTAAAAGCATCTTACGAGTATTAGATACGAATTATG TGACAAAAAATATCAATCAAATAATGAATGATTTAGACAATCTTGGAAATAGCTTTGATAATTCAAAAAAATATGATGAT GAGCAAAAGGAATTTATTAAGCATCAAATTTCCGATATTGCACAATAA
Upstream 100 bases:
>100_bases TTGATTTCCCAACATTTGGTCTTCCTAGTAAAGTTACGAAACCAGATTTATAATTATTCAAAAGACTTTTAAAAGATCCA TAATAAAATTCTGCTCAAAA
Downstream 100 bases:
>100_bases AAAAAGCGTAGATAAGATCTACGCTTCCTTCAAATAGACGTTTTGGTTTAAATTTATTTTTTAATTCCTTCTTCCACCAC CTTGAAGAGCAATCATCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRMAELIKTKNGLRGFFAYALSDQDCYLLDKLPFSVVFKLQE CGKDVVEIVIKNLIMSSAQIIVHDRENNLEYKSNSENISERCKSILRVLDTNYVTKNINQIMNDLDNLGNSFDNSKKYDD EQKEFIKHQISDIAQ
Sequences:
>Translated_175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRMAELIKTKNGLRGFFAYALSDQDCYLLDKLPFSVVFKLQE CGKDVVEIVIKNLIMSSAQIIVHDRENNLEYKSNSENISERCKSILRVLDTNYVTKNINQIMNDLDNLGNSFDNSKKYDD EQKEFIKHQISDIAQ >Mature_175_residues MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRMAELIKTKNGLRGFFAYALSDQDCYLLDKLPFSVVFKLQE CGKDVVEIVIKNLIMSSAQIIVHDRENNLEYKSNSENISERCKSILRVLDTNYVTKNINQIMNDLDNLGNSFDNSKKYDD EQKEFIKHQISDIAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20193; Mature: 20193
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRMAELIKTKNGLRGFFAYALS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC DQDCYLLDKLPFSVVFKLQECGKDVVEIVIKNLIMSSAQIIVHDRENNLEYKSNSENISE CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH RCKSILRVLDTNYVTKNINQIMNDLDNLGNSFDNSKKYDDEQKEFIKHQISDIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKTINLKEASFTQAINISAQWCKEWGEDLLSEEVLADRMAELIKTKNGLRGFFAYALS CCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHC DQDCYLLDKLPFSVVFKLQECGKDVVEIVIKNLIMSSAQIIVHDRENNLEYKSNSENISE CCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHH RCKSILRVLDTNYVTKNINQIMNDLDNLGNSFDNSKKYDDEQKEFIKHQISDIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA