Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966647

Identifier: 123966647

GI number: 123966647

Start: 1252982

End: 1254160

Strand: Reverse

Name: 123966647

Synonym: P9515_14141

Alternate gene names: NA

Gene position: 1254160-1252982 (Counterclockwise)

Preceding gene: 123966650

Following gene: 123966643

Centisome position: 73.59

GC content: 25.53

Gene sequence:

>1179_bases
ATGAAAAGTAATAGCAGAATACTTTTAGTAAAAGTAATAACAATAGGTTTTGTATCTTCACTTTTCTTACTTTTATTTAT
TATCTGTGAAATTAAATTTAGACAATATAGATATAGATCAAGAAACATATGGAAATCATCTGCAATTAACTGGTTACCTA
ATCAGGCTAAAACATGTAAAAAAAATATAGAAAGTTCATCATCAGAAAATATTGGTAAATATATAGTTGAAGGATGTTTT
ACGAATAAAGATATTTACAATAACCTCCACCATTCAACTATTGATGATAATTCGGAGGTTCATAAAAAACTCAATGGTAA
TAAAAATATATGGATTATGGGAGATTCTTGGATAGAAAAACTTAACCAAAACGAAAGAGAAAAATTATACATTACAAAAG
CATTAGATCAAAAGGCAAAGAACTTAAGAATAATGGGAGTTTCTTCTTGGTCTCCATTGATAATGAATCTTGTTTTCAGA
CAAAAAATAAAAGAATATAATGAAATTCCTGATATTCTTACTATTTTCTTAGATCAAACTGATATTGGAGATGATTACTG
TAGATATAGACCTTATGTAATAAGAGATAATAAAAGTAAATTAAAAGGTGTAACCAGAAATAATAGTTTTGCATATAACG
ATAAAAGAACTTTGAATTATTTTCGATTAGGTGAAAGAAGTAAATCAGGTTTTGAATATTTTTCAAAATGGACTTTAATA
ACTTTAATTAATAAACTCGAAATATCAAAAATTTCCGGAATAACACATTGCGAATATAAAGATATTTTACCGTATCAAAT
AGGAGAACAATTTAGTCCTAATGGAGCAAGTGTCAATAATTATGTTAGATATTTTGAGAGAAATTTATCTAATTTTGTAC
TTGAAGCTAAGGAGAAAAATCCGAATATAAAAATAATTTTGGTAACCCATGATTGGGCTCAACATAATTTGCCTAAAGAT
AATATTTCTTATATGCCAAATAATATTTCAAATTTAGTATTTAATATTGCGAGCCAATTTACAGATTTTGTAAAAGTACT
TCATGTCTCTTTAGATTATTATCCAGAGAATAGTTCCTTAGAACAAATATTTATGTATCCAAAAGATCTTTTTAGCCATC
TAAGGGATTCTCAAATATTATCTTCAAAAATTTCAAAGAAGATATTAGATATAAATTAG

Upstream 100 bases:

>100_bases
TACTTATTATTACTTTAAGATTCCTCTTATTCTTGAACTTTGAAAATTAAAAATTTATTTATAAAAAATAACTAATCCCT
AGTATTTATTTTTAAAGAAA

Downstream 100 bases:

>100_bases
ATTCTTTTTTAAAGATATAGCGCACTATTTATCATCTTATAGAAAAAAAATAAGTTTTATTAATTCTTTCAAATGATATA
AATGGACCTTTATTTCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MKSNSRILLVKVITIGFVSSLFLLLFIICEIKFRQYRYRSRNIWKSSAINWLPNQAKTCKKNIESSSSENIGKYIVEGCF
TNKDIYNNLHHSTIDDNSEVHKKLNGNKNIWIMGDSWIEKLNQNEREKLYITKALDQKAKNLRIMGVSSWSPLIMNLVFR
QKIKEYNEIPDILTIFLDQTDIGDDYCRYRPYVIRDNKSKLKGVTRNNSFAYNDKRTLNYFRLGERSKSGFEYFSKWTLI
TLINKLEISKISGITHCEYKDILPYQIGEQFSPNGASVNNYVRYFERNLSNFVLEAKEKNPNIKIILVTHDWAQHNLPKD
NISYMPNNISNLVFNIASQFTDFVKVLHVSLDYYPENSSLEQIFMYPKDLFSHLRDSQILSSKISKKILDIN

Sequences:

>Translated_392_residues
MKSNSRILLVKVITIGFVSSLFLLLFIICEIKFRQYRYRSRNIWKSSAINWLPNQAKTCKKNIESSSSENIGKYIVEGCF
TNKDIYNNLHHSTIDDNSEVHKKLNGNKNIWIMGDSWIEKLNQNEREKLYITKALDQKAKNLRIMGVSSWSPLIMNLVFR
QKIKEYNEIPDILTIFLDQTDIGDDYCRYRPYVIRDNKSKLKGVTRNNSFAYNDKRTLNYFRLGERSKSGFEYFSKWTLI
TLINKLEISKISGITHCEYKDILPYQIGEQFSPNGASVNNYVRYFERNLSNFVLEAKEKNPNIKIILVTHDWAQHNLPKD
NISYMPNNISNLVFNIASQFTDFVKVLHVSLDYYPENSSLEQIFMYPKDLFSHLRDSQILSSKISKKILDIN
>Mature_392_residues
MKSNSRILLVKVITIGFVSSLFLLLFIICEIKFRQYRYRSRNIWKSSAINWLPNQAKTCKKNIESSSSENIGKYIVEGCF
TNKDIYNNLHHSTIDDNSEVHKKLNGNKNIWIMGDSWIEKLNQNEREKLYITKALDQKAKNLRIMGVSSWSPLIMNLVFR
QKIKEYNEIPDILTIFLDQTDIGDDYCRYRPYVIRDNKSKLKGVTRNNSFAYNDKRTLNYFRLGERSKSGFEYFSKWTLI
TLINKLEISKISGITHCEYKDILPYQIGEQFSPNGASVNNYVRYFERNLSNFVLEAKEKNPNIKIILVTHDWAQHNLPKD
NISYMPNNISNLVFNIASQFTDFVKVLHVSLDYYPENSSLEQIFMYPKDLFSHLRDSQILSSKISKKILDIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46006; Mature: 46006

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNSRILLVKVITIGFVSSLFLLLFIICEIKFRQYRYRSRNIWKSSAINWLPNQAKTCK
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
KNIESSSSENIGKYIVEGCFTNKDIYNNLHHSTIDDNSEVHKKLNGNKNIWIMGDSWIEK
HHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHH
LNQNEREKLYITKALDQKAKNLRIMGVSSWSPLIMNLVFRQKIKEYNEIPDILTIFLDQT
CCCCCCCEEEEEHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
DIGDDYCRYRPYVIRDNKSKLKGVTRNNSFAYNDKRTLNYFRLGERSKSGFEYFSKWTLI
CCCCHHHHCCCEEEECCHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHHH
TLINKLEISKISGITHCEYKDILPYQIGEQFSPNGASVNNYVRYFERNLSNFVLEAKEKN
HHHHHHHHHHHCCCCCCCHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCC
PNIKIILVTHDWAQHNLPKDNISYMPNNISNLVFNIASQFTDFVKVLHVSLDYYPENSSL
CCEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
EQIFMYPKDLFSHLRDSQILSSKISKKILDIN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSNSRILLVKVITIGFVSSLFLLLFIICEIKFRQYRYRSRNIWKSSAINWLPNQAKTCK
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHH
KNIESSSSENIGKYIVEGCFTNKDIYNNLHHSTIDDNSEVHKKLNGNKNIWIMGDSWIEK
HHHCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEHHHHHH
LNQNEREKLYITKALDQKAKNLRIMGVSSWSPLIMNLVFRQKIKEYNEIPDILTIFLDQT
CCCCCCCEEEEEHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
DIGDDYCRYRPYVIRDNKSKLKGVTRNNSFAYNDKRTLNYFRLGERSKSGFEYFSKWTLI
CCCCHHHHCCCEEEECCHHHHCCCCCCCCEEECCCCHHHHHCCCCCCCHHHHHHHHHHHH
TLINKLEISKISGITHCEYKDILPYQIGEQFSPNGASVNNYVRYFERNLSNFVLEAKEKN
HHHHHHHHHHHCCCCCCCHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCC
PNIKIILVTHDWAQHNLPKDNISYMPNNISNLVFNIASQFTDFVKVLHVSLDYYPENSSL
CCEEEEEEECCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCH
EQIFMYPKDLFSHLRDSQILSSKISKKILDIN
HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA