| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966641
Identifier: 123966641
GI number: 123966641
Start: 1247036
End: 1247860
Strand: Direct
Name: 123966641
Synonym: P9515_14081
Alternate gene names: NA
Gene position: 1247036-1247860 (Clockwise)
Preceding gene: 123966640
Following gene: 123966642
Centisome position: 73.18
GC content: 25.58
Gene sequence:
>825_bases ATGTTTTTTTGGAGAAAATTATTCCCATATTTGCAAAAGTCAATCCCAAGGAATAGAAATAACCAATTACTTAAGATTTT GGATAAAGTTTCAACAACTTATCACTCCTTATATGAAAATCTTAATTATGATTGTGAATATAATGGAGAGTTATTTTTAT TAAATAAATTAAATCAGAGTAATAATCTTAATTGTATATTTGATGTAGGAGCTAATATTGGAAACTATTCTTTGTTAGCA AGAGAGATAAATAAACAATGTTTGATTTTTGCATTTGAACCAGTCCCAAAGACATATATTGATCTAAAAGAAAACGTTTT AAATAAAGACATTAAAACTTTTAATATCGGACTTGGAAGTGATACTAGGGAAGAAATGATGCTGGTTTCAAAAGATAGTA AACTTTCTACATTACTATTAGAAAATAGTAATTTATCAACTAAAGATAATCCTCAATATGTCTCTGTCAAAATAATAAGT GGTGATGAATTTTTAAAAAATAATTATGAACTTAATCAAATTTCATTATTAAAAATAGACACAGAGGGCTATGAATCGGA AGTATTAAAAGGTTTTAGGAGAATAATGCCAAAAGTTAATATCGTCCAATTTGAGTATGGCAAAGCAAATTTATTCTCTA AATATTTTCTTAAAGATTATTTTAATGATTACTCTGATGACTACTATATTGGAAAGCTTTATCCTAATGGAGTTGAATTC TTTGAAAAATACAAATGGGATTTAGATGATTTAATAGGTCCTAATTATATTATGGTCAAAAGGTCTCGTAAAGATTTATA TGCTTTACTTTCGATTAAAGTTTAA
Upstream 100 bases:
>100_bases ATATCTAAAGTTTGCAATTATCAAAAAATAAACTGGGGCAAATCTTCAAACAAATAAAATAATAGTTCAATATATTCTAT AATAAATCAAAAATATAAAT
Downstream 100 bases:
>100_bases TTTAAATTTTCTATAAAATAATAATAAAAAAAACAGACTTAATAGAAACGTTTATCATTTCATCAAAAAATTCAAGTTTA GTTACCTGAATTAAATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase FkbM; SAM-Dependent Methyltransferase
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MFFWRKLFPYLQKSIPRNRNNQLLKILDKVSTTYHSLYENLNYDCEYNGELFLLNKLNQSNNLNCIFDVGANIGNYSLLA REINKQCLIFAFEPVPKTYIDLKENVLNKDIKTFNIGLGSDTREEMMLVSKDSKLSTLLLENSNLSTKDNPQYVSVKIIS GDEFLKNNYELNQISLLKIDTEGYESEVLKGFRRIMPKVNIVQFEYGKANLFSKYFLKDYFNDYSDDYYIGKLYPNGVEF FEKYKWDLDDLIGPNYIMVKRSRKDLYALLSIKV
Sequences:
>Translated_274_residues MFFWRKLFPYLQKSIPRNRNNQLLKILDKVSTTYHSLYENLNYDCEYNGELFLLNKLNQSNNLNCIFDVGANIGNYSLLA REINKQCLIFAFEPVPKTYIDLKENVLNKDIKTFNIGLGSDTREEMMLVSKDSKLSTLLLENSNLSTKDNPQYVSVKIIS GDEFLKNNYELNQISLLKIDTEGYESEVLKGFRRIMPKVNIVQFEYGKANLFSKYFLKDYFNDYSDDYYIGKLYPNGVEF FEKYKWDLDDLIGPNYIMVKRSRKDLYALLSIKV >Mature_274_residues MFFWRKLFPYLQKSIPRNRNNQLLKILDKVSTTYHSLYENLNYDCEYNGELFLLNKLNQSNNLNCIFDVGANIGNYSLLA REINKQCLIFAFEPVPKTYIDLKENVLNKDIKTFNIGLGSDTREEMMLVSKDSKLSTLLLENSNLSTKDNPQYVSVKIIS GDEFLKNNYELNQISLLKIDTEGYESEVLKGFRRIMPKVNIVQFEYGKANLFSKYFLKDYFNDYSDDYYIGKLYPNGVEF FEKYKWDLDDLIGPNYIMVKRSRKDLYALLSIKV
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32242; Mature: 32242
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFWRKLFPYLQKSIPRNRNNQLLKILDKVSTTYHSLYENLNYDCEYNGELFLLNKLNQS CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCC NNLNCIFDVGANIGNYSLLAREINKQCLIFAFEPVPKTYIDLKENVLNKDIKTFNIGLGS CCCEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCC DTREEMMLVSKDSKLSTLLLENSNLSTKDNPQYVSVKIISGDEFLKNNYELNQISLLKID CCHHHEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEEEEE TEGYESEVLKGFRRIMPKVNIVQFEYGKANLFSKYFLKDYFNDYSDDYYIGKLYPNGVEF CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH FEKYKWDLDDLIGPNYIMVKRSRKDLYALLSIKV HHHHCCCHHHHCCCCEEEEEECCCCEEEEEEECC >Mature Secondary Structure MFFWRKLFPYLQKSIPRNRNNQLLKILDKVSTTYHSLYENLNYDCEYNGELFLLNKLNQS CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCCC NNLNCIFDVGANIGNYSLLAREINKQCLIFAFEPVPKTYIDLKENVLNKDIKTFNIGLGS CCCEEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCC DTREEMMLVSKDSKLSTLLLENSNLSTKDNPQYVSVKIISGDEFLKNNYELNQISLLKID CCHHHEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCHHHHCCCCCCEEEEEEEE TEGYESEVLKGFRRIMPKVNIVQFEYGKANLFSKYFLKDYFNDYSDDYYIGKLYPNGVEF CCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHH FEKYKWDLDDLIGPNYIMVKRSRKDLYALLSIKV HHHHCCCHHHHCCCCEEEEEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA